RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ASB14A6NK59 587 aa19.42■□□□□ 0.7
LTBR-215ENST00000546296 FUT2Q10981 343 aa19.42■□□□□ 0.7
LTBR-215ENST00000546296 PRAMEF19Q5SWL8 479 aa19.42■□□□□ 0.7
LTBR-215ENST00000546296 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
LTBR-215ENST00000546296 TPCN1Q9ULQ1 816 aa19.42■□□□□ 0.7
LTBR-215ENST00000546296 NID2Q14112 1375 aa19.42■□□□□ 0.7
LTBR-215ENST00000546296 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
LTBR-215ENST00000546296 IGHA2P01877 340 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 CCND3P30281 292 aaPredicted RBP19.41■□□□□ 0.7
LTBR-215ENST00000546296 MAMDC4Q6UXC1 1216 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 FGD4Q96M96 766 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 DEFB118Q96PH6 123 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 MPHOSPH6Q99547 160 aaKnown RBP19.41■□□□□ 0.7
LTBR-215ENST00000546296 KIF2CQ99661 725 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 SYNGAP1Q96PV0 1343 aa19.41■□□□□ 0.7
LTBR-215ENST00000546296 B4DLN1 442 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 TFRCP02786 760 aaKnown RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 GJB1P08034 283 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 MRPL12P52815 198 aaKnown RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 ARMCX2Q7L311 632 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 SAMD3Q8N6K7 520 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 TRPV1Q8NER1 839 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
LTBR-215ENST00000546296 CUL5Q93034 780 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 PHKBQ93100 1093 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 SLC26A6Q9BXS9 759 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 MAP3K20Q9NYL2 800 aaKnown RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 RBM27Q9P2N5 1060 aaKnown RBP19.4■□□□□ 0.7
LTBR-215ENST00000546296 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
LTBR-215ENST00000546296 POTEFA5A3E0 1075 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 OPLAHO14841 1288 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 PFKFB2O60825 505 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 PPFIA3O75145 1194 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 SNAI1O95863 264 aaPredicted RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 IFNAR1P17181 557 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 HOXA13P31271 388 aaPredicted RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 SSRP1Q08945 709 aaKnown RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 RABEP1Q15276 862 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 TRIM22Q8IYM9 498 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 TAAR1Q96RJ0 339 aa19.39■□□□□ 0.69
LTBR-215ENST00000546296 PAK6Q9NQU5 681 aaPredicted RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 ZHX1Q9UKY1 873 aaPredicted RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 BAZ2BQ9UIF8 2168 aaKnown RBP19.39■□□□□ 0.69
LTBR-215ENST00000546296 CYBAP13498 195 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 HSD17B4P51659 736 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 NAPAP54920 295 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 ACVR2BQ13705 512 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 NTRK3Q16288 839 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 ARHGEF16Q5VV41 709 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 WWC2Q6AWC2 1192 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 FCHSD1Q86WN1 690 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 DNERQ8NFT8 737 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 NSUN6Q8TEA1 469 aaKnown RBP19.38■□□□□ 0.69
LTBR-215ENST00000546296 U2AF1L4Q8WU68 220 aaKnown RBP19.38■□□□□ 0.69
LTBR-215ENST00000546296 RMDN3Q96TC7 470 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 ABHD16BQ9H3Z7 469 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 PSTPIP2Q9H939 334 aa19.38■□□□□ 0.69
LTBR-215ENST00000546296 ZNFX1Q9P2E3 1918 aaKnown RBP19.38■□□□□ 0.69
LTBR-215ENST00000546296 ASTN1O14525 1302 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 LOC102724159A0A0B4J2E5 919 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 CDKL5O76039 1030 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 SGPL1O95470 568 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 SCG2P13521 617 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 EN2P19622 333 aaPredicted RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 GJA8P48165 433 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 PDE4DQ08499 809 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 SCRN1Q12765 414 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 PWP2Q15269 919 aaKnown RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 PFKFB3Q16875 520 aaPredicted RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 NECAB1Q8N987 351 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 SMARCC2Q8TAQ2 1214 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 RNF26Q9BY78 433 aaPredicted RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 COL20A1Q9P218 1284 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 DDX49Q9Y6V7 483 aaKnown RBP19.37■□□□□ 0.69
LTBR-215ENST00000546296 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
LTBR-215ENST00000546296 hCG_1984214I3L0E3 225 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 SEPT4O43236 478 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 ST18O60284 1047 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 MSCO60682 206 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 ZNF865P0CJ78 1059 aaPredicted RBP19.36■□□□□ 0.69
LTBR-215ENST00000546296 GHRHRQ02643 423 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 ME3Q16798 604 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 ZNF713Q8N859 430 aaPredicted RBP19.36■□□□□ 0.69
LTBR-215ENST00000546296 BARHL2Q9NY43 387 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 FAM184BQ9ULE4 1060 aa19.36■□□□□ 0.69
LTBR-215ENST00000546296 STXBP3O00186 592 aa19.35■□□□□ 0.69
LTBR-215ENST00000546296 EIF2AK2P19525 551 aaKnown RBP19.35■□□□□ 0.69
LTBR-215ENST00000546296 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
LTBR-215ENST00000546296 PPP1R18Q6NYC8 613 aa19.35■□□□□ 0.69
LTBR-215ENST00000546296 USP17L6PQ6QN14 398 aa19.35■□□□□ 0.69
LTBR-215ENST00000546296 IWS1Q96ST2 819 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms