RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 KIF11P52732 1056 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 NAA35Q5VZE5 725 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 ARL6IP4Q66PJ3 421 aaKnown RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 FKBP3Q00688 224 aaKnown RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 P3H4Q92791 437 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 INTS9Q9NV88 658 aaKnown RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 FAM170AA1A519 330 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 NR1D1P20393 614 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 FTCDO95954 541 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 STRBPQ96SI9 672 aaKnown RBP13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 COMMD10Q9Y6G5 202 aa13.39□□□□□ -0.27
NPC1L1-204ENST00000546276 TROVE2P10155 538 aaKnown RBP eCLIP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 PRR16Q569H4 304 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 HARSP12081 509 aaKnown RBP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 ADCY8P40145 1251 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 SLC7A5Q01650 507 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 CCDC14Q49A88 953 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.38□□□□□ -0.279e-7■□□□□ 10
NPC1L1-204ENST00000546276 RUNDC3BQ96NL0 473 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 PBKQ96KB5 322 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 I3L4J1 428 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 SUN1O94901 812 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 CFBP00751 764 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 LMNB1P20700 586 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 GCKP35557 465 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 TADA2BQ86TJ2 420 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 NDST4Q9H3R1 872 aa13.38□□□□□ -0.27
NPC1L1-204ENST00000546276 ANO9A1A5B4 782 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 THAP12O43422 761 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 NR2F2P24468 414 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 LRRC41Q15345 812 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 TYW1Q9NV66 732 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 DAAM1Q9Y4D1 1078 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 ERBB3P21860 1342 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 GAS7O60861 476 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 TULP4Q9NRJ4 1543 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 EIF3CLB5ME19 914 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 DKC1O60832 514 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 SERPING1P05155 500 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 PLCG1P19174 1290 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 MCAMP43121 646 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 STRN3Q13033 797 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 LGSNQ5TDP6 509 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 EIF3CQ99613 913 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 HMGB1P1B2RPK0 211 aaPredicted RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 HSPA1LP34931 641 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 WDR24Q96S15 920 aa13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-204ENST00000546276 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 IFNAR2P48551 515 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 CUL4BQ13620 913 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 MMS22LQ6ZRQ5 1243 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 CYB5R4Q7L1T6 521 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 VCX3BQ9H321 246 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 DHX9Q08211 1270 aaKnown RBP13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 MUM1Q2TAK8 710 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
NPC1L1-204ENST00000546276 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms