RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 FGD4Q96M96 766 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 SCG2P13521 617 aa23.98■■□□□ 1.43
SCARB1-211ENST00000546215 AKAP17AQ02040 695 aaKnown RBP23.98■■□□□ 1.43
SCARB1-211ENST00000546215 SSRP1Q08945 709 aaKnown RBP23.98■■□□□ 1.43
SCARB1-211ENST00000546215 SLC9C1Q4G0N8 1177 aa23.98■■□□□ 1.43
SCARB1-211ENST00000546215 TRMT44Q8IYL2 757 aaKnown RBP23.98■■□□□ 1.43
SCARB1-211ENST00000546215 SH3TC2Q8TF17 1288 aa23.98■■□□□ 1.43
SCARB1-211ENST00000546215 PURBQ96QR8 312 aaKnown RBP23.98■■□□□ 1.43
SCARB1-211ENST00000546215 SH2B1Q9NRF2 756 aaPredicted RBP23.98■■□□□ 1.43
SCARB1-211ENST00000546215 LCTP09848 1927 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 CDKL5O76039 1030 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 CFBP00751 764 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 OLFML2BQ68BL8 750 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 TYW1BQ6NUM6 668 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 TRIM22Q8IYM9 498 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 BARHL2Q9NY43 387 aa23.97■■□□□ 1.43
SCARB1-211ENST00000546215 BRCA2P51587 3418 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 SOWAHBA6NEL2 793 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 hCG_1984214I3L0E3 225 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 STXBP3O00186 592 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 CALML3P27482 149 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 MCM2P49736 904 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 HSD17B4P51659 736 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 ZNF467Q7Z7K2 595 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-211ENST00000546215 SAMD3Q8N6K7 520 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 ZNF713Q8N859 430 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-211ENST00000546215 MAP3K20Q9NYL2 800 aaKnown RBP23.96■■□□□ 1.43
SCARB1-211ENST00000546215 ASTN1O14525 1302 aa23.96■■□□□ 1.43
SCARB1-211ENST00000546215 RBBP6Q7Z6E9 1792 aaKnown RBP23.96■■□□□ 1.43
SCARB1-211ENST00000546215 DTNBO60941 627 aa23.95■■□□□ 1.43
SCARB1-211ENST00000546215 HMGCRP04035 888 aa23.95■■□□□ 1.43
SCARB1-211ENST00000546215 SYTL5Q8TDW5 730 aaPredicted RBP23.95■■□□□ 1.43
SCARB1-211ENST00000546215 ARMC5Q96C12 935 aa23.95■■□□□ 1.43
SCARB1-211ENST00000546215 COL20A1Q9P218 1284 aa23.95■■□□□ 1.43
SCARB1-211ENST00000546215 TRIM32Q13049 653 aa23.95■■□□□ 1.42
SCARB1-211ENST00000546215 CCDC83Q8IWF9 413 aa23.95■■□□□ 1.42
SCARB1-211ENST00000546215 NSUN7Q8NE18 718 aaKnown RBP23.95■■□□□ 1.42
SCARB1-211ENST00000546215 STK36Q9NRP7 1315 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 DEXIO95424 95 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 INHAP05111 366 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 NAPAP54920 295 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 PPP1R18Q6NYC8 613 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 MAMDC4Q6UXC1 1216 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 TMX3Q96JJ7 454 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 TINF2Q9BSI4 451 aa23.94■■□□□ 1.42
SCARB1-211ENST00000546215 GCOM1H8Y6P7 765 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-211ENST00000546215 MEIS2O14770 477 aa23.93■■□□□ 1.42
SCARB1-211ENST00000546215 POLR2MP0CAP2 368 aa23.93■■□□□ 1.42
SCARB1-211ENST00000546215 HOXA13P31271 388 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-211ENST00000546215 CYP2C19P33261 490 aa23.93■■□□□ 1.42
SCARB1-211ENST00000546215 MSL3Q8N5Y2 521 aaKnown RBP23.93■■□□□ 1.42
SCARB1-211ENST00000546215 ZNF333Q96JL9 665 aa23.93■■□□□ 1.42
SCARB1-211ENST00000546215 PSTPIP2Q9H939 334 aa23.93■■□□□ 1.42
SCARB1-211ENST00000546215 BIN2Q9UBW5 565 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-211ENST00000546215 PIK3CDO00329 1044 aa23.92■■□□□ 1.42
SCARB1-211ENST00000546215 FDPSP14324 419 aaKnown RBP23.92■■□□□ 1.42
SCARB1-211ENST00000546215 MAP3K21Q5TCX8 1036 aa23.92■■□□□ 1.42
SCARB1-211ENST00000546215 MFSD14CQ5VZR4 134 aa23.92■■□□□ 1.42
SCARB1-211ENST00000546215 SHISA4Q96DD7 197 aa23.92■■□□□ 1.42
SCARB1-211ENST00000546215 TAAR1Q96RJ0 339 aa23.92■■□□□ 1.42
SCARB1-211ENST00000546215 ADD3Q9UEY8 706 aaKnown RBP23.92■■□□□ 1.42
SCARB1-211ENST00000546215 SYNGAP1Q96PV0 1343 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 JAK2O60674 1132 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 CACNB2Q08289 660 aaPredicted RBP23.91■■□□□ 1.42
SCARB1-211ENST00000546215 USP17L6PQ6QN14 398 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 TNS4Q8IZW8 715 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 DNERQ8NFT8 737 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 AIFM3Q96NN9 605 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 ORC3Q9UBD5 711 aaPredicted RBP23.91■■□□□ 1.42
SCARB1-211ENST00000546215 MCM3APO60318 1980 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 SMCO2A6NFE2 343 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 ALDH5A1P51649 535 aaPredicted RBP23.91■■□□□ 1.42
SCARB1-211ENST00000546215 UBXN2AP68543 259 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 LLPHQ9BRT6 129 aaKnown RBP23.91■■□□□ 1.42
SCARB1-211ENST00000546215 RIC8AQ9NPQ8 531 aa23.91■■□□□ 1.42
SCARB1-211ENST00000546215 SNAI1O95863 264 aaPredicted RBP23.9■■□□□ 1.42
SCARB1-211ENST00000546215 PRKAR2AP13861 404 aaKnown RBP23.9■■□□□ 1.42
SCARB1-211ENST00000546215 SMARCC2Q8TAQ2 1214 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 MORC4Q8TE76 937 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 CUL5Q93034 780 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 ZMYND12Q9H0C1 365 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 SH3GLB2Q9NR46 395 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 VPS54Q9P1Q0 977 aa23.9■■□□□ 1.42
SCARB1-211ENST00000546215 DDX49Q9Y6V7 483 aaKnown RBP23.9■■□□□ 1.42
SCARB1-211ENST00000546215 LOC102724159A0A0B4J2E5 919 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 ESYT2A0FGR8 921 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 ASB14A6NK59 587 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 PWP2Q15269 919 aaKnown RBP23.89■■□□□ 1.41
SCARB1-211ENST00000546215 MTFR1Q15390 333 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 ARMCX2Q7L311 632 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 CCDC12Q8WUD4 166 aaPredicted RBP23.89■■□□□ 1.41
SCARB1-211ENST00000546215 ABHD8Q96I13 439 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 RMDN3Q96TC7 470 aa23.89■■□□□ 1.41
SCARB1-211ENST00000546215 EDNRBP24530 442 aa23.88■■□□□ 1.41
SCARB1-211ENST00000546215 MRPL12P52815 198 aaKnown RBP23.88■■□□□ 1.41
SCARB1-211ENST00000546215 UBE2SQ16763 222 aa23.88■■□□□ 1.41
SCARB1-211ENST00000546215 FCHSD1Q86WN1 690 aa23.88■■□□□ 1.41
SCARB1-211ENST00000546215 TEX2Q8IWB9 1127 aa23.88■■□□□ 1.41
SCARB1-211ENST00000546215 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
SCARB1-211ENST00000546215 PXMP2Q9NR77 195 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms