RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 WWC2Q6AWC2 1192 aa23.64■■□□□ 1.37
HMGA2-211ENST00000545998 CPLX2Q6PUV4 134 aaKnown RBP23.64■■□□□ 1.37
HMGA2-211ENST00000545998 HEATR3Q7Z4Q2 680 aa23.64■■□□□ 1.37
HMGA2-211ENST00000545998 GPKOWQ92917 476 aaPredicted RBP eCLIP23.64■■□□□ 1.37
HMGA2-211ENST00000545998 SLC26A6Q9BXS9 759 aa23.64■■□□□ 1.37
HMGA2-211ENST00000545998 RBM27Q9P2N5 1060 aaKnown RBP23.64■■□□□ 1.37
HMGA2-211ENST00000545998 INHAP05111 366 aa23.63■■□□□ 1.37
HMGA2-211ENST00000545998 PKN1Q16512 942 aa23.63■■□□□ 1.37
HMGA2-211ENST00000545998 PFKFB3Q16875 520 aaPredicted RBP23.63■■□□□ 1.37
HMGA2-211ENST00000545998 ZNF467Q7Z7K2 595 aaPredicted RBP23.63■■□□□ 1.37
HMGA2-211ENST00000545998 ZNF333Q96JL9 665 aa23.63■■□□□ 1.37
HMGA2-211ENST00000545998 SOWAHBA6NEL2 793 aa23.62■■□□□ 1.37
HMGA2-211ENST00000545998 CALML3P27482 149 aa23.62■■□□□ 1.37
HMGA2-211ENST00000545998 HSD17B4P51659 736 aa23.62■■□□□ 1.37
HMGA2-211ENST00000545998 TRIM32Q13049 653 aa23.62■■□□□ 1.37
HMGA2-211ENST00000545998 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
HMGA2-211ENST00000545998 PURBQ96QR8 312 aaKnown RBP23.62■■□□□ 1.37
HMGA2-211ENST00000545998 BIN2Q9UBW5 565 aaPredicted RBP23.62■■□□□ 1.37
HMGA2-211ENST00000545998 ASTN1O14525 1302 aa23.62■■□□□ 1.37
HMGA2-211ENST00000545998 hCG_1984214I3L0E3 225 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 CDKL5O76039 1030 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 CD2BP2O95400 341 aaKnown RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 CTDNEP1O95476 244 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 CFBP00751 764 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 SCG2P13521 617 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 AKAP17AQ02040 695 aaKnown RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 SSRP1Q08945 709 aaKnown RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 ST3GAL1Q11201 340 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 TRIM22Q8IYM9 498 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 SAMD3Q8N6K7 520 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 ZNF713Q8N859 430 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 BARHL2Q9NY43 387 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 MAP3K20Q9NYL2 800 aaKnown RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 STXBP3O00186 592 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 TYW1BQ6NUM6 668 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 MAMDC4Q6UXC1 1216 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 MSL3Q8N5Y2 521 aaKnown RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 SYTL5Q8TDW5 730 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 ABHD8Q96I13 439 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 TINF2Q9BSI4 451 aa23.61■■□□□ 1.37
HMGA2-211ENST00000545998 SH2B1Q9NRF2 756 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-211ENST00000545998 CYP2C19P33261 490 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 UBXN2AP68543 259 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 MAP3K21Q5TCX8 1036 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 MFSD14CQ5VZR4 134 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 PPP1R18Q6NYC8 613 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 COL20A1Q9P218 1284 aa23.6■■□□□ 1.37
HMGA2-211ENST00000545998 GCOM1H8Y6P7 765 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-211ENST00000545998 POLR2MP0CAP2 368 aa23.59■■□□□ 1.37
HMGA2-211ENST00000545998 NAPAP54920 295 aa23.59■■□□□ 1.37
HMGA2-211ENST00000545998 CACNB2Q08289 660 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-211ENST00000545998 ADD3Q9UEY8 706 aaKnown RBP23.59■■□□□ 1.37
HMGA2-211ENST00000545998 SYNGAP1Q96PV0 1343 aa23.59■■□□□ 1.37
HMGA2-211ENST00000545998 KIAA0100Q14667 2235 aaKnown RBP23.58■■□□□ 1.37
HMGA2-211ENST00000545998 PRKAR2AP13861 404 aaKnown RBP23.58■■□□□ 1.37
HMGA2-211ENST00000545998 HOXA13P31271 388 aaPredicted RBP23.58■■□□□ 1.37
HMGA2-211ENST00000545998 MCM2P49736 904 aa23.58■■□□□ 1.37
HMGA2-211ENST00000545998 NSUN7Q8NE18 718 aaKnown RBP23.58■■□□□ 1.37
HMGA2-211ENST00000545998 DNERQ8NFT8 737 aa23.58■■□□□ 1.37
HMGA2-211ENST00000545998 PSTPIP2Q9H939 334 aa23.58■■□□□ 1.37
HMGA2-211ENST00000545998 STK36Q9NRP7 1315 aa23.58■■□□□ 1.37
HMGA2-211ENST00000545998 PIK3CDO00329 1044 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 MEIS2O14770 477 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 DEXIO95424 95 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 ALDH5A1P51649 535 aaPredicted RBP23.57■■□□□ 1.36
HMGA2-211ENST00000545998 MTFR1Q15390 333 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 CCDC83Q8IWF9 413 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 TAAR1Q96RJ0 339 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 LOC102724159A0A0B4J2E5 919 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 ASB14A6NK59 587 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 DTNBO60941 627 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 PWP2Q15269 919 aaKnown RBP23.57■■□□□ 1.36
HMGA2-211ENST00000545998 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 MORC4Q8TE76 937 aa23.57■■□□□ 1.36
HMGA2-211ENST00000545998 LRRC37A2A6NM11 1700 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 SNAI1O95863 264 aaPredicted RBP23.56■■□□□ 1.36
HMGA2-211ENST00000545998 CCL5P13501 91 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 USP17L6PQ6QN14 398 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 TRPV1Q8NER1 839 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 SHISA4Q96DD7 197 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 UNC93B1Q9H1C4 597 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 RPTORQ8N122 1335 aa23.56■■□□□ 1.36
HMGA2-211ENST00000545998 MYCP01106 439 aaPredicted RBP23.55■■□□□ 1.36
HMGA2-211ENST00000545998 CYBAP13498 195 aa23.55■■□□□ 1.36
HMGA2-211ENST00000545998 CUL5Q93034 780 aa23.55■■□□□ 1.36
HMGA2-211ENST00000545998 RMDN3Q96TC7 470 aa23.55■■□□□ 1.36
HMGA2-211ENST00000545998 RIC8AQ9NPQ8 531 aa23.55■■□□□ 1.36
HMGA2-211ENST00000545998 NRBP1Q9UHY1 535 aa23.55■■□□□ 1.36
HMGA2-211ENST00000545998 DDX49Q9Y6V7 483 aaKnown RBP23.55■■□□□ 1.36
HMGA2-211ENST00000545998 SMCO2A6NFE2 343 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 JAK2O60674 1132 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 FDPSP14324 419 aaKnown RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 EDNRBP24530 442 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 PRAMEF19Q5SWL8 479 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 TEX2Q8IWB9 1127 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 NSUN6Q8TEA1 469 aaKnown RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 CCDC12Q8WUD4 166 aaPredicted RBP23.54■■□□□ 1.36
HMGA2-211ENST00000545998 TMX3Q96JJ7 454 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 AIFM3Q96NN9 605 aa23.54■■□□□ 1.36
HMGA2-211ENST00000545998 LLPHQ9BRT6 129 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms