RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	SREBF2	Q12772	1141 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	INF2	Q27J81	1249 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	EARS2	Q5JPH6	523 aa	Known RBP	11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NEK8	Q86SG6	692 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RIOX2	Q8IUF8	465 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	JMY	Q8N9B5	988 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CHST13	Q8NET6	341 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TBCK	Q8TEA7	893 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CLEC4D	Q8WXI8	215 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PARK7	Q99497	189 aa	Known RBP	11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ACAD9	Q9H845	621 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GDPD2	Q9HCC8	539 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CREBZF	Q9NS37	354 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	HOMER2	Q9NSB8	354 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RCOR1	Q9UKL0	485 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CLIC4	Q9Y696	253 aa		11.45	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GOLGA6L4	A6NEF3	574 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	FAM205C	A6NFA0	338 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NFIB	O00712	420 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	OPLAH	O14841	1288 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SPTLC2	O15270	562 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TAL1	P17542	331 aa	Predicted RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	HOXA13	P31271	388 aa	Predicted RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NASP	P49321	788 aa	Predicted RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TOB1	P50616	345 aa	Predicted RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	HSD17B4	P51659	736 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	APLP1	P51693	650 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SLC39A14	Q15043	492 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	DEFB115	Q30KQ5	88 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NOM1	Q5C9Z4	860 aa	Known RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	MUM1L1	Q5H9M0	696 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NSMF	Q6X4W1	530 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RNF207	Q6ZRF8	634 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	FCHSD1	Q86WN1	690 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	FAM43A	Q8N2R8	423 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TMEM87A	Q8NBN3	555 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	LINC00301	Q8NCQ3	95 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	KCNG4	Q8TDN1	519 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	LEO1	Q8WVC0	666 aa	Predicted RBP	11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ANO3	Q9BYT9	981 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SPATC1L	Q9H0A9	340 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	BTBD7	Q9P203	1132 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PCDHB6	Q9Y5E3	794 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SRCAP	Q6ZRS2	3230 aa		11.44	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ELP1	O95163	1332 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	FAM155A	B1AL88	458 aa	Predicted RBP	11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CYP2C8	P10632	490 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	USP11	P51784	963 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CCNA1	P78396	465 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GHRHR	Q02643	423 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GRM1	Q13255	1194 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ORC2	Q13416	577 aa	Predicted RBP	11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ZNF174	Q15697	407 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	LETM2	Q2VYF4	491 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NCAPG2	Q86XI2	1143 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GPRC5A	Q8NFJ5	357 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TBC1D5	Q92609	795 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PGBD1	Q96JS3	809 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PTPN18	Q99952	460 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RBPJL	Q9UBG7	517 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RIPK3	Q9Y572	518 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RLF	Q13129	1914 aa		11.43	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PARP14	Q460N5	1801 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CCNT1	O60563	726 aa	Known RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PPP6R2	O75170	966 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CNMD	O75829	334 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	GCFC2	P16383	781 aa	Known RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	MCM7	P33993	719 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ME1	P48163	572 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	UBE2H	P62256	183 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RPS6	P62753	249 aa	Known RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ERVK-9	P63128	1117 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ERVK-24	P63145	666 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NOG	Q13253	232 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	NBR1	Q14596	966 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PTPA	Q15257	358 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TAF1C	Q15572	869 aa	Predicted RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CYP4F22	Q6NT55	531 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	IFNL1	Q8IU54	200 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	CCAR1	Q8IX12	1150 aa	Known RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	REM2	Q8IYK8	340 aa	Predicted RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SHCBP1	Q8NEM2	672 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	MROH8	Q9H579	483 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	LMBRD1	Q9NUN5	540 aa		11.42	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PFAS	O15067	1338 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	RASSF10	A6NK89	507 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	LAD1	O00515	517 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ERCC3	P19447	782 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ZNF76	P36508	570 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	SREBF1	P36956	1147 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	TM4SF4	P48230	202 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	ARHGAP4	P98171	946 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	BAAT	Q14032	418 aa	Predicted RBP	11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831		Q3C1V9	767 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	PPP4R3A	Q6IN85	833 aa		11.41	□□□□□ -0.58
NPIPA1-208	ENST00000545831	POTEE	Q6S8J3	1075 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms