RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 FSCN1Q16658 493 aaKnown RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 USH1GQ495M9 461 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 TAPT1Q6NXT6 567 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 SLC30A10Q6XR72 485 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 CPVLQ9H3G5 476 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 U3KPZ7 1027 aaPredicted RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 ARVCFO00192 962 aa23.23■■□□□ 1.31
CHD4-213ENST00000545584 CTAGE5O15320 804 aa23.23■■□□□ 1.31
CHD4-213ENST00000545584 CABYRO75952 493 aa23.23■■□□□ 1.31
CHD4-213ENST00000545584 SHHQ15465 462 aa23.23■■□□□ 1.31
CHD4-213ENST00000545584 LAMA3Q16787 3333 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 TLR3O15455 904 aaKnown RBP23.22■■□□□ 1.31
CHD4-213ENST00000545584 CDK7P50613 346 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 PDE4DQ08499 809 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 ADGRF4Q8IZF3 695 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 DNERQ8NFT8 737 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 LRRC37A2A6NM11 1700 aa23.22■■□□□ 1.31
CHD4-213ENST00000545584 LCTP09848 1927 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 ITGB8P26012 769 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 DUSP28Q4G0W2 176 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 CXCL17Q6UXB2 119 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 RGS22Q8NE09 1264 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 MAF1Q9H063 256 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 ABCB11O95342 1321 aa23.21■■□□□ 1.31
CHD4-213ENST00000545584 PTH1RQ03431 593 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 FPGSQ05932 587 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 C9orf50Q5SZB4 431 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 Q7L0L9 218 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 RALYLQ86SE5 291 aaKnown RBP23.2■■□□□ 1.3
CHD4-213ENST00000545584 WDR11Q9BZH6 1224 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 VAT1LQ9HCJ6 419 aa23.2■■□□□ 1.3
CHD4-213ENST00000545584 ERICH2A1L162 156 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 TIMP1P01033 207 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 CYP21A2P08686 494 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 MCF2L2Q86YR7 1114 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 SEZ6LQ9BYH1 1024 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 TBX21Q9UL17 535 aa23.19■■□□□ 1.3
CHD4-213ENST00000545584 MRPL11Q9Y3B7 192 aaKnown RBP23.19■■□□□ 1.3
CHD4-213ENST00000545584 SGSM2O43147 1006 aa23.18■■□□□ 1.3
CHD4-213ENST00000545584 SEC23AQ15436 765 aa23.18■■□□□ 1.3
CHD4-213ENST00000545584 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
CHD4-213ENST00000545584 FAM126BQ8IXS8 530 aa23.18■■□□□ 1.3
CHD4-213ENST00000545584 RBM47A0AV96 593 aaKnown RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 IFIT3O14879 490 aaKnown RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 ITGA7Q13683 1181 aa23.17■■□□□ 1.3
CHD4-213ENST00000545584 SART3Q15020 963 aaKnown RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 BRDTQ58F21 947 aaPredicted RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 FAM109BQ6ICB4 259 aaPredicted RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 NCOA7Q8NI08 942 aa23.17■■□□□ 1.3
CHD4-213ENST00000545584 SCFD2Q8WU76 684 aa23.17■■□□□ 1.3
CHD4-213ENST00000545584 RNPC3Q96LT9 517 aaKnown RBP23.17■■□□□ 1.3
CHD4-213ENST00000545584 JMJD4Q9H9V9 463 aa23.17■■□□□ 1.3
CHD4-213ENST00000545584 MTMR10Q9NXD2 777 aa23.17■■□□□ 1.3
CHD4-213ENST00000545584 KLRF2D3W0D1 207 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 NKRFO15226 690 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHD4-213ENST00000545584 PTGS1P23219 599 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 EDNRBP24530 442 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 CPT1AP50416 773 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 TMEM63BQ5T3F8 832 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 MFSD5Q6N075 450 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 OR6J1Q8NGC5 347 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 POLR3EQ9NVU0 708 aa23.16■■□□□ 1.3
CHD4-213ENST00000545584 ZNF697Q5TEC3 545 aa23.15■■□□□ 1.3
CHD4-213ENST00000545584 STAG2Q8N3U4 1231 aa23.15■■□□□ 1.3
CHD4-213ENST00000545584 TMEM199Q8N511 208 aa23.15■■□□□ 1.3
CHD4-213ENST00000545584 SLC43A3Q8NBI5 491 aa23.15■■□□□ 1.3
CHD4-213ENST00000545584 NSUN6Q8TEA1 469 aaKnown RBP23.15■■□□□ 1.3
CHD4-213ENST00000545584 AMNQ9BXJ7 453 aa23.15■■□□□ 1.3
CHD4-213ENST00000545584 GPHNQ9NQX3 736 aaPredicted RBP23.15■■□□□ 1.3
CHD4-213ENST00000545584 MYH6P13533 1939 aa23.14■■□□□ 1.3
CHD4-213ENST00000545584 E7EWF7 191 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 EPHB4P54760 987 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 PPIGQ13427 754 aaKnown RBP eCLIP23.14■■□□□ 1.29
CHD4-213ENST00000545584 TTLL4Q14679 1199 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 WTAPQ15007 396 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 SYTL5Q8TDW5 730 aaPredicted RBP23.14■■□□□ 1.29
CHD4-213ENST00000545584 TBC1D5Q92609 795 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 MAP4K1Q92918 833 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 PPP1R12CQ9BZL4 782 aa23.14■■□□□ 1.29
CHD4-213ENST00000545584 PALM3A6NDB9 673 aaPredicted RBP23.13■■□□□ 1.29
CHD4-213ENST00000545584 CD4P01730 458 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 SMAD3P84022 425 aaKnown RBP23.13■■□□□ 1.29
CHD4-213ENST00000545584 TRAF1Q13077 416 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 TAAR1Q96RJ0 339 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 RMDN3Q96TC7 470 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 MAD2L2Q9UI95 211 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 STXBP5LQ9Y2K9 1186 aa23.13■■□□□ 1.29
CHD4-213ENST00000545584 MYL3P08590 195 aa23.12■■□□□ 1.29
CHD4-213ENST00000545584 TXNP10599 105 aaKnown RBP23.12■■□□□ 1.29
CHD4-213ENST00000545584 PSMC6P62333 389 aa23.12■■□□□ 1.29
CHD4-213ENST00000545584 GRM4Q14833 912 aa23.12■■□□□ 1.29
CHD4-213ENST00000545584 IWS1Q96ST2 819 aa23.12■■□□□ 1.29
CHD4-213ENST00000545584 RBM8AQ9Y5S9 174 aaKnown RBP23.12■■□□□ 1.29
CHD4-213ENST00000545584 ZBTB5O15062 677 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 KPNA6O60684 536 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 CFBP00751 764 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 STXBP2Q15833 593 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms