RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SHHQ15465 462 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 NOL8Q76FK4 1167 aaKnown RBP24.72■■□□□ 1.55
SCARB1-210ENST00000545493 DEFB123Q8N688 67 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 UBAC1Q9BSL1 405 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 TMEM39AQ9NV64 488 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 TAF6LQ9Y6J9 622 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 EYSQ5T1H1 3165 aa24.72■■□□□ 1.55
SCARB1-210ENST00000545493 MROH7Q68CQ1 1323 aa24.71■■□□□ 1.55
SCARB1-210ENST00000545493 CYP21A2P08686 494 aa24.71■■□□□ 1.55
SCARB1-210ENST00000545493 EPHB4P54760 987 aa24.71■■□□□ 1.55
SCARB1-210ENST00000545493 FSCN1Q16658 493 aaKnown RBP24.71■■□□□ 1.55
SCARB1-210ENST00000545493 ADGRF4Q8IZF3 695 aa24.71■■□□□ 1.55
SCARB1-210ENST00000545493 DCDC2CA8MYV0 355 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 ARVCFO00192 962 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 RAG1P15918 1043 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 EDNRBP24530 442 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 IFIT1BQ5T764 474 aaKnown RBP24.7■■□□□ 1.54
SCARB1-210ENST00000545493 IQSEC1Q6DN90 963 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 CXCL17Q6UXB2 119 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 FAM126BQ8IXS8 530 aa24.7■■□□□ 1.54
SCARB1-210ENST00000545493 SGSM2O43147 1006 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 DYNC1LI2O43237 492 aaPredicted RBP24.69■■□□□ 1.54
SCARB1-210ENST00000545493 PARP1P09874 1014 aaKnown RBP24.69■■□□□ 1.54
SCARB1-210ENST00000545493 QRICH1Q2TAL8 776 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 DUSP28Q4G0W2 176 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 KIAA1211Q6ZU35 1233 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 RUFY2Q8WXA3 655 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 Q9Y3F1 56 aa24.69■■□□□ 1.54
SCARB1-210ENST00000545493 ABCB11O95342 1321 aa24.68■■□□□ 1.54
SCARB1-210ENST00000545493 RBM47A0AV96 593 aaKnown RBP24.68■■□□□ 1.54
SCARB1-210ENST00000545493 SLC43A3Q8NBI5 491 aa24.68■■□□□ 1.54
SCARB1-210ENST00000545493 AP5M1Q9H0R1 490 aa24.68■■□□□ 1.54
SCARB1-210ENST00000545493 JMJD4Q9H9V9 463 aa24.68■■□□□ 1.54
SCARB1-210ENST00000545493 STOX1Q6ZVD7 989 aa24.67■■□□□ 1.54
SCARB1-210ENST00000545493 STAG2Q8N3U4 1231 aa24.67■■□□□ 1.54
SCARB1-210ENST00000545493 DNERQ8NFT8 737 aa24.67■■□□□ 1.54
SCARB1-210ENST00000545493 VTI1AQ96AJ9 217 aa24.67■■□□□ 1.54
SCARB1-210ENST00000545493 MTMR10Q9NXD2 777 aa24.67■■□□□ 1.54
SCARB1-210ENST00000545493 GRIN2DO15399 1336 aa24.66■■□□□ 1.54
SCARB1-210ENST00000545493 FPGSQ05932 587 aa24.66■■□□□ 1.54
SCARB1-210ENST00000545493 RGS22Q8NE09 1264 aa24.66■■□□□ 1.54
SCARB1-210ENST00000545493 WDR11Q9BZH6 1224 aa24.66■■□□□ 1.54
SCARB1-210ENST00000545493 COL20A1Q9P218 1284 aa24.66■■□□□ 1.54
SCARB1-210ENST00000545493 U3KPZ7 1027 aaPredicted RBP24.66■■□□□ 1.54
SCARB1-210ENST00000545493 UNC80Q8N2C7 3258 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 CABYRO75952 493 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 TIMP1P01033 207 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 CD4P01730 458 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 PDE4DQ08499 809 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 TBC1D5Q92609 795 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 SENP2Q9HC62 589 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 MAD2L2Q9UI95 211 aa24.65■■□□□ 1.54
SCARB1-210ENST00000545493 E7EWF7 191 aa24.64■■□□□ 1.54
SCARB1-210ENST00000545493 DHX16O60231 1041 aaKnown RBP24.64■■□□□ 1.54
SCARB1-210ENST00000545493 PSMC6P62333 389 aa24.64■■□□□ 1.54
SCARB1-210ENST00000545493 TRDNQ13061 729 aa24.64■■□□□ 1.54
SCARB1-210ENST00000545493 SLC35G1Q2M3R5 365 aa24.64■■□□□ 1.54
SCARB1-210ENST00000545493 SYTL5Q8TDW5 730 aaPredicted RBP24.64■■□□□ 1.54
SCARB1-210ENST00000545493 SCN10AQ9Y5Y9 1956 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 ZEB2O60315 1214 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 ITGA7Q13683 1181 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 PPP2R5BQ15173 497 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 FAM109BQ6ICB4 259 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-210ENST00000545493 MFSD5Q6N075 450 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 FBXO11Q86XK2 927 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 OR6J1Q8NGC5 347 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 MTMR8Q96EF0 704 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 RNPC3Q96LT9 517 aaKnown RBP24.63■■□□□ 1.53
SCARB1-210ENST00000545493 GUCD1Q96NT3 240 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 PPP1R12CQ9BZL4 782 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 VAT1LQ9HCJ6 419 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 KIAA1217Q5T5P2 1943 aa24.63■■□□□ 1.53
SCARB1-210ENST00000545493 PALM3A6NDB9 673 aaPredicted RBP24.62■■□□□ 1.53
SCARB1-210ENST00000545493 OPLAHO14841 1288 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 TLR3O15455 904 aaKnown RBP24.62■■□□□ 1.53
SCARB1-210ENST00000545493 PPP1R11O60927 126 aaPredicted RBP24.62■■□□□ 1.53
SCARB1-210ENST00000545493 ARIH2O95376 493 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 ANTXR2P58335 489 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 GRM4Q14833 912 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 COPS5Q92905 334 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 MAP4K1Q92918 833 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 MPHOSPH6Q99547 160 aaKnown RBP24.62■■□□□ 1.53
SCARB1-210ENST00000545493 MAF1Q9H063 256 aa24.62■■□□□ 1.53
SCARB1-210ENST00000545493 CHST3Q7LGC8 479 aa24.61■■□□□ 1.53
SCARB1-210ENST00000545493 RALYLQ86SE5 291 aaKnown RBP24.61■■□□□ 1.53
SCARB1-210ENST00000545493 MB21D2Q8IYB1 491 aaPredicted RBP24.61■■□□□ 1.53
SCARB1-210ENST00000545493 NCOA7Q8NI08 942 aa24.61■■□□□ 1.53
SCARB1-210ENST00000545493 SCFD2Q8WU76 684 aa24.61■■□□□ 1.53
SCARB1-210ENST00000545493 TAAR1Q96RJ0 339 aa24.61■■□□□ 1.53
SCARB1-210ENST00000545493 MRPL11Q9Y3B7 192 aaKnown RBP24.61■■□□□ 1.53
SCARB1-210ENST00000545493 RBM8AQ9Y5S9 174 aaKnown RBP24.61■■□□□ 1.53
SCARB1-210ENST00000545493 KLRF2D3W0D1 207 aa24.6■■□□□ 1.53
SCARB1-210ENST00000545493 IFIT3O14879 490 aaKnown RBP24.6■■□□□ 1.53
SCARB1-210ENST00000545493 CPT1AP50416 773 aa24.6■■□□□ 1.53
SCARB1-210ENST00000545493 SMAD3P84022 425 aaKnown RBP24.6■■□□□ 1.53
SCARB1-210ENST00000545493 PURAQ00577 322 aaKnown RBP24.6■■□□□ 1.53
SCARB1-210ENST00000545493 SKAP1Q86WV1 359 aa24.6■■□□□ 1.53
SCARB1-210ENST00000545493 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.6■■□□□ 1.535e-8■□□□□ 8.8
SCARB1-210ENST00000545493 STXBP5LQ9Y2K9 1186 aa24.6■■□□□ 1.53
SCARB1-210ENST00000545493 UMODL1Q5DID0 1318 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms