RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TNFRSF10BO14763 440 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 KIAA0355O15063 1070 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 ERC2O15083 957 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 FAM13AO94988 1023 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 HOXC6P09630 235 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 BMP2P12643 396 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 BACE1P56817 501 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 ARHGAP4P98171 946 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 RALBP1Q15311 655 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 PUM3Q15397 648 aaKnown RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 CCDC85BQ15834 202 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 C4orf17Q53FE4 359 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 GNASQ5JWF2 1037 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 GJC2Q5T442 439 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 KANK3Q6NY19 840 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 DNAJC14Q6Y2X3 702 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 TRIM46Q7Z4K8 759 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 ZFPM1Q8IX07 1006 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 ALDH16A1Q8IZ83 802 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 RNF217Q8TC41 542 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 NECAB3Q96P71 396 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 PBX4Q9BYU1 374 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 EPHX3Q9H6B9 360 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 POLMQ9NP87 494 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 GNL3LQ9NVN8 582 aaKnown RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 C9orf78Q9NZ63 289 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-220ENST00000544550 ZNF232Q9UNY5 417 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 COG5Q9UP83 839 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 MUC3AQ02505 3323 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 RFX7Q2KHR2 1363 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 LTBP2Q14767 1821 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SALL1Q9NSC2 1324 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 DDTLA6NHG4 134 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 DCDC2CA8MYV0 355 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SMIM22K7EJ46 135 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 GRM8O00222 908 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SEPT4O43236 478 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 MAP4K4O95819 1239 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 CYBAP13498 195 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SLC5A1P13866 664 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 CAP2P40123 477 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 ADCYAP1R1P41586 468 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 MARSP56192 900 aaKnown RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TLE2Q04725 743 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PPIGQ13427 754 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PICALMQ13492 652 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 GRB14Q14449 540 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 RTN1Q16799 776 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TWISTNBQ3B726 338 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 WDR44Q5JSH3 913 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 C6orf118Q5T5N4 469 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 OLFML2BQ68BL8 750 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PSRC1Q6PGN9 363 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 G2E3Q7L622 706 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 CCDC84Q86UT8 332 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TSPYL6Q8N831 410 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 LPIN2Q92539 896 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TOX2Q96NM4 488 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PAGR1Q9BTK6 254 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 WDR18Q9BV38 432 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PUS3Q9BZE2 481 aaKnown RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PHACTR1Q9C0D0 580 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 PORCNQ9H237 461 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TXNRD2Q9NNW7 524 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 GINM1Q9NU53 330 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 TMEM39AQ9NV64 488 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 SLC5A4Q9NY91 659 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 STIM2Q9P246 746 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 RBPJLQ9UBG7 517 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 HERC5Q9UII4 1024 aaKnown RBP5.07□□□□□ -1.6
SNHG1-220ENST00000544550 RABGAP1Q9Y3P9 1069 aa5.07□□□□□ -1.6
SNHG1-220ENST00000544550 GAKO14976 1311 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 MROH7Q68CQ1 1323 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PI4K2BG5E9Z4 385 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PQBP1O60828 265 aaKnown RBP5.06□□□□□ -1.6
SNHG1-220ENST00000544550 TIMP1P01033 207 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ASNSP08243 561 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ERCC3P19447 782 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 MPSTP25325 297 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ITGB8P26012 769 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PRDX5P30044 214 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 TXLNAP40222 546 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 PLA2G4AP47712 749 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 EPHB4P54760 987 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 POU4F2Q12837 409 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ADGRE1Q14246 886 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 LRRC41Q15345 812 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 C11orf91Q3C1V1 193 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 EPHA10Q5JZY3 1008 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 BEND3Q5T5X7 828 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 WDR78Q5VTH9 848 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 MFSD5Q6N075 450 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 LYSMD3Q7Z3D4 306 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 ANKRD33Q7Z3H0 272 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 RNF180Q86T96 592 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 DPP9Q86TI2 863 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 DZIP1Q86YF9 867 aaKnown RBP5.06□□□□□ -1.6
SNHG1-220ENST00000544550 MICALL1Q8N3F8 863 aa5.06□□□□□ -1.6
SNHG1-220ENST00000544550 TMEM199Q8N511 208 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms