RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ANKRD13CQ8N6S4 541 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PRMT6Q96LA8 375 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 GLIS2Q9BZE0 524 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ABHD10Q9NUJ1 306 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 GAKO14976 1311 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 NRDCO43847 1150 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SORBS3O60504 671 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PPP2R3AQ06190 1150 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CALCRLQ16602 461 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 MB21D1Q8N884 522 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 GDAP1L1Q96MZ0 367 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PNMA5Q96PV4 448 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PDS5AQ29RF7 1337 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ROBO3Q96MS0 1386 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 MACROD2A1Z1Q3 448 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ZSCAN12O43309 604 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC93Q567U6 631 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CYP2W1Q8TAV3 490 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 DRC1Q96MC2 740 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 P2RX7Q99572 595 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 DUSP9Q99956 384 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 NOC4LQ9BVI4 516 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 COA1Q9GZY4 146 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 MMRN2Q9H8L6 949 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF277Q9NRM2 450 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SMARCAL1Q9NZC9 954 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 RCCD1A6NED2 376 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TMED8Q6PL24 325 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 KIAA0895Q8NCT3 520 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CRAMP1Q96RY5 1269 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SPZ1Q9BXG8 430 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TRIM34Q9BYJ4 488 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TMX4Q9H1E5 349 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SEMA6BQ9H3T3 888 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 VEZTQ9HBM0 779 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TTLL1O95922 423 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PBX1P40424 430 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TRAPPC10P48553 1259 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 GABPAQ06546 454 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CDC37Q16543 378 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 DDX12PQ92771 950 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 EHD2Q9NZN4 543 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SYCP1Q15431 976 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 NOC3LQ8WTT2 800 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 LARP4BQ92615 738 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 PODXL2Q9NZ53 605 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 MYMKA6NI61 221 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ZMYND10O75800 440 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ARID5AQ03989 594 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 MAEAQ7L5Y9 396 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 SIAH1Q8IUQ4 282 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 KIFC2Q96AC6 838 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 TRIM9Q9C026 710 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
BRCA2-206ENST00000544455 DDX25Q9UHL0 483 aaKnown RBP4.22□□□□□ -1.73
BRCA2-206ENST00000544455 POTEB3A0JP26 581 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 YDJCA8MPS7 323 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 POTECB2RU33 542 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF185O15231 689 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 CLCN6P51797 869 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 CYP4A11Q02928 519 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 ICA1Q05084 483 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 POTEBQ6S5H4 581 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 TMC4Q7Z404 712 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 FCHSD1Q86WN1 690 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 CSRNP1Q96S65 589 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 CGNQ9P2M7 1197 aaKnown RBP4.21□□□□□ -1.73
BRCA2-206ENST00000544455 RHOBTB3O94955 611 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 BMP15O95972 392 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC175P0C221 793 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF543Q08ER8 600 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 TBC1D8BQ0IIM8 1120 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 QRICH1Q2TAL8 776 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 SV2BQ7L1I2 683 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 ELMO3Q96BJ8 720 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 TUBGCP2Q9BSJ2 902 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 RIOX1Q9H6W3 641 aa4.21□□□□□ -1.73
BRCA2-206ENST00000544455 MAGEC2Q9UBF1 373 aaPredicted RBP4.21□□□□□ -1.73
BRCA2-206ENST00000544455 A0A1W2PRG0 241 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 PRR16Q569H4 304 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 HAS1Q92839 578 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 TAF1P21675 1872 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 POTEFA5A3E0 1075 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 HLA-DOAP06340 250 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 POTEIP0CG38 1075 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 ZSCAN20P17040 1043 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-206ENST00000544455 ADRA2BP18089 450 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 GNAQP50148 359 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 POTEGQ6S5H5 508 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 POTEEQ6S8J3 1075 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 PIGOQ8TEQ8 1089 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 MASTLQ96GX5 879 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 CRACR2AQ9BSW2 395 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 NLRC4Q9NPP4 1024 aa4.21□□□□□ -1.74
BRCA2-206ENST00000544455 RASSF10A6NK89 507 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms