RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 ELP1O95163 1332 aa11.54□□□□□ -0.56
MDH1-216ENST00000544381 KIF28PB7ZC32 967 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 RAD21O60216 631 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 GADD45BO75293 160 aaPredicted RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 U2AF2P26368 475 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■■■■■ 36.9
MDH1-216ENST00000544381 GJA5P36382 358 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 PRKG1Q13976 671 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 MORN1Q5T089 497 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 MYSM1Q5VVJ2 828 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 DIS3L2Q8IYB7 885 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 MKL1Q969V6 931 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
MDH1-216ENST00000544381 SEC63Q9UGP8 760 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
MDH1-216ENST00000544381 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 BTBD18B2RXH4 712 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 ZMYND10O75800 440 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 SNHG28P0DPA3 235 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 KRT2P35908 639 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
MDH1-216ENST00000544381 NLRP5P59047 1200 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 SREBF2Q12772 1141 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 TTLL12Q14166 644 aaPredicted RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 NOSTRINQ8IVI9 506 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 DCAF4Q8WV16 495 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
MDH1-216ENST00000544381 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 RTEL1Q9NZ71 1219 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.57
MDH1-216ENST00000544381 CYTH3O43739 400 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 S1PR4O95977 384 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 CD46P15529 392 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 CALML3P27482 149 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 CLCN1P35523 988 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
MDH1-216ENST00000544381 STK38Q15208 465 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
MDH1-216ENST00000544381 SHROOM1Q2M3G4 852 aaPredicted RBP11.51□□□□□ -0.57
MDH1-216ENST00000544381 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
MDH1-216ENST00000544381 CCDC148Q8NFR7 591 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
MDH1-216ENST00000544381 UBA5Q9GZZ9 404 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 ZBTB21Q9ULJ3 1066 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
MDH1-216ENST00000544381 YEATS4O95619 227 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 ASNSP08243 561 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 CAP2P40123 477 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 SLC1A4P43007 532 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 JAG1P78504 1218 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 ANO1Q5XXA6 986 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 DCAF15Q66K64 600 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 HOMER1Q86YM7 354 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
MDH1-216ENST00000544381 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 SPSB2Q99619 263 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 PTPN18Q99952 460 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 FTOQ9C0B1 505 aaKnown RBP eCLIP11.5□□□□□ -0.57
MDH1-216ENST00000544381 CPVLQ9H3G5 476 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 GOPCQ9HD26 462 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 POLR3EQ9NVU0 708 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 CLIC4Q9Y696 253 aa11.5□□□□□ -0.57
MDH1-216ENST00000544381 COL6A3P12111 3177 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 F5H6K3 240 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
MDH1-216ENST00000544381 ME1P48163 572 aa11.49□□□□□ -0.57
MDH1-216ENST00000544381 NASPP49321 788 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms