RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 UHRF1Q96T88 793 aaPredicted RBP23.61■■□□□ 1.37
LPCAT3-211ENST00000543794 RANBP17Q9H2T7 1088 aaKnown RBP23.61■■□□□ 1.37
LPCAT3-211ENST00000543794 ADD3Q9UEY8 706 aaKnown RBP23.61■■□□□ 1.37
LPCAT3-211ENST00000543794 LOC102724159A0A0B4J2E5 919 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 PFKMP08237 780 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 PWP2Q15269 919 aaKnown RBP23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 BTNL9Q6UXG8 535 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 DCAF4Q8WV16 495 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 WDR11Q9BZH6 1224 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 TRMT13Q9NUP7 481 aaKnown RBP23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 POLR3EQ9NVU0 708 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 XIRP2A4UGR9 3374 aa23.6■■□□□ 1.37
LPCAT3-211ENST00000543794 NCOR1O75376 2440 aa23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 RBM47A0AV96 593 aaKnown RBP23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 ATP2A2P16615 1042 aaKnown RBP23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 PURAQ00577 322 aaKnown RBP23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 TTBK2Q6IQ55 1244 aa23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 OTUD7AQ8TE49 926 aaPredicted RBP23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 TSPYL2Q9H2G4 693 aaPredicted RBP23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 MTMR7Q9Y216 660 aa23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 TNKSO95271 1327 aa23.59■■□□□ 1.37
LPCAT3-211ENST00000543794 ZBBXA8MT70 800 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 RANBP6O60518 1105 aaKnown RBP23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 FGRP09769 529 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 CYP2C9P11712 490 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 ALDH5A1P51649 535 aaPredicted RBP23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 TTLL4Q14679 1199 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 CCDC96Q2M329 555 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 IL27Q8NEV9 243 aa23.58■■□□□ 1.37
LPCAT3-211ENST00000543794 NFIBO00712 420 aa23.57■■□□□ 1.36
LPCAT3-211ENST00000543794 ORC4O43929 436 aa23.57■■□□□ 1.36
LPCAT3-211ENST00000543794 SLC16A2P36021 539 aa23.57■■□□□ 1.36
LPCAT3-211ENST00000543794 CPT1AP50416 773 aa23.57■■□□□ 1.36
LPCAT3-211ENST00000543794 MTG1Q9BT17 334 aaPredicted RBP23.57■■□□□ 1.36
LPCAT3-211ENST00000543794 BMP1P13497 986 aa23.56■■□□□ 1.36
LPCAT3-211ENST00000543794 POU3F3P20264 500 aaPredicted RBP23.56■■□□□ 1.36
LPCAT3-211ENST00000543794 TMEM67Q5HYA8 995 aa23.56■■□□□ 1.36
LPCAT3-211ENST00000543794 SYDE2Q5VT97 1194 aa23.56■■□□□ 1.36
LPCAT3-211ENST00000543794 LRRC37A2A6NM11 1700 aa23.56■■□□□ 1.36
LPCAT3-211ENST00000543794 MYL3P08590 195 aa23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 ALX1Q15699 326 aa23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 VPS53Q5VIR6 699 aa23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 CLEC4DQ8WXI8 215 aa23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 GPHNQ9NQX3 736 aaPredicted RBP23.55■■□□□ 1.36
LPCAT3-211ENST00000543794 PTPDC1A2A3K4 754 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 TOP1P11387 765 aaKnown RBP23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 NBPF20Q3BBV1 942 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 MICALL1Q8N3F8 863 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 OR6J1Q8NGC5 347 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 TMEM47Q9BQJ4 181 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 TCP11L1Q9NUJ3 509 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 PCDHB15Q9Y5E8 787 aa23.54■■□□□ 1.36
LPCAT3-211ENST00000543794 NKRFO15226 690 aaKnown RBP eCLIP23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 KPNA6O60684 536 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 CA3P07451 260 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 ACTN1P12814 892 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 MX1P20591 662 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 RFC2P35250 354 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 BRDTQ58F21 947 aaPredicted RBP23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 NFRKBQ6P4R8 1299 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 PHOSPHO2Q8TCD6 241 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 RAPGEFL1Q9UHV5 662 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 PNMA2Q9UL42 364 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 MTCH2Q9Y6C9 303 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 REV3LO60673 3130 aa23.53■■□□□ 1.36
LPCAT3-211ENST00000543794 A6NJR5 290 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 RFXAPO00287 272 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 PITPNM1O00562 1244 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 IQCF3P0C7M6 154 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 EDNRBP24530 442 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 CALML3P27482 149 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 TFF2Q03403 129 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 AAK1Q2M2I8 961 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 SLC30A10Q6XR72 485 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 RNF207Q6ZRF8 634 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 SLC9A7Q96T83 725 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 GPCPD1Q9NPB8 672 aa23.52■■□□□ 1.36
LPCAT3-211ENST00000543794 GBF1Q92538 1859 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 LCTP09848 1927 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 RPS6P62753 249 aaKnown RBP23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 PTPN11Q06124 597 aaPredicted RBP23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 PDE4DQ08499 809 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 FAM47CQ5HY64 1035 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 RETREG2Q8NC44 543 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 SCFD2Q8WU76 684 aa23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 NECAB3Q96P71 396 aaPredicted RBP23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 FRMPD2Q68DX3 1309 aaPredicted RBP23.51■■□□□ 1.35
LPCAT3-211ENST00000543794 GTPBP6O43824 516 aaPredicted RBP23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 FGAP02671 866 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 PDHBP11177 359 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 PPP2R5BQ15173 497 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 DNERQ8NFT8 737 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 MPHOSPH6Q99547 160 aaKnown RBP23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 HELLSQ9NRZ9 838 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 BDP1A6H8Y1 2624 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 RAD50Q92878 1312 aa23.5■■□□□ 1.35
LPCAT3-211ENST00000543794 SALL3Q9BXA9 1300 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms