RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 WDR11Q9BZH6 1224 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 PRDM6Q9NQX0 595 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 TCP11L1Q9NUJ3 509 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 MCM3APO60318 1980 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 PTPDC1A2A3K4 754 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 NFIBO00712 420 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 ALDH5A1P51649 535 aaPredicted RBP26.66■■□□□ 1.86
CDKN3-207ENST00000543789 WNT8AQ9H1J5 351 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 ALDH8A1Q9H2A2 487 aaPredicted RBP26.66■■□□□ 1.86
CDKN3-207ENST00000543789 NKX2-4Q9H2Z4 354 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 SLC28A3Q9HAS3 691 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 GPCPD1Q9NPB8 672 aa26.66■■□□□ 1.86
CDKN3-207ENST00000543789 FRMPD2Q68DX3 1309 aaPredicted RBP26.65■■□□□ 1.86
CDKN3-207ENST00000543789 SUPT20HL2P0C7V6 817 aa26.65■■□□□ 1.86
CDKN3-207ENST00000543789 MCMDC2Q4G0Z9 681 aa26.65■■□□□ 1.86
CDKN3-207ENST00000543789 POLR3EQ9NVU0 708 aa26.65■■□□□ 1.86
CDKN3-207ENST00000543789 PNMA2Q9UL42 364 aa26.65■■□□□ 1.86
CDKN3-207ENST00000543789 PDE1AP54750 535 aa26.64■■□□□ 1.86
CDKN3-207ENST00000543789 ADGRE1Q14246 886 aa26.64■■□□□ 1.86
CDKN3-207ENST00000543789 FAM227BQ96M60 508 aa26.64■■□□□ 1.86
CDKN3-207ENST00000543789 YBX2Q9Y2T7 364 aaKnown RBP26.64■■□□□ 1.86
CDKN3-207ENST00000543789 SLC4A7Q9Y6M7 1214 aa26.64■■□□□ 1.86
CDKN3-207ENST00000543789 RBM47A0AV96 593 aaKnown RBP26.63■■□□□ 1.85
CDKN3-207ENST00000543789 IGFBP4P22692 258 aa26.63■■□□□ 1.85
CDKN3-207ENST00000543789 CALML3P27482 149 aa26.63■■□□□ 1.85
CDKN3-207ENST00000543789 CPT1AP50416 773 aa26.63■■□□□ 1.85
CDKN3-207ENST00000543789 ATXN2LQ8WWM7 1075 aaKnown RBP26.63■■□□□ 1.85
CDKN3-207ENST00000543789 CLEC4DQ8WXI8 215 aa26.63■■□□□ 1.85
CDKN3-207ENST00000543789 GPHNQ9NQX3 736 aaPredicted RBP26.63■■□□□ 1.85
CDKN3-207ENST00000543789 MYL3P08590 195 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 PDHBP11177 359 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 PURAQ00577 322 aaKnown RBP26.62■■□□□ 1.85
CDKN3-207ENST00000543789 RNF207Q6ZRF8 634 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 TICAM2Q86XR7 235 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 SCLYQ96I15 445 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 TTC14Q96N46 770 aa26.62■■□□□ 1.85
CDKN3-207ENST00000543789 TRMT13Q9NUP7 481 aaKnown RBP26.62■■□□□ 1.85
CDKN3-207ENST00000543789 A0A0D9SFI3 127 aa26.61■■□□□ 1.85
CDKN3-207ENST00000543789 HSPD1P10809 573 aaKnown RBP26.61■■□□□ 1.85
CDKN3-207ENST00000543789 RABGGTBP53611 331 aa26.61■■□□□ 1.85
CDKN3-207ENST00000543789 CCDC85BQ15834 202 aaPredicted RBP26.61■■□□□ 1.85
CDKN3-207ENST00000543789 OR6J1Q8NGC5 347 aa26.61■■□□□ 1.85
CDKN3-207ENST00000543789 MPHOSPH6Q99547 160 aaKnown RBP26.61■■□□□ 1.85
CDKN3-207ENST00000543789 MTG1Q9BT17 334 aaPredicted RBP26.61■■□□□ 1.85
CDKN3-207ENST00000543789 TNKSO95271 1327 aa26.61■■□□□ 1.85
CDKN3-207ENST00000543789 CYP2C9P11712 490 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 PDE4DQ08499 809 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 ZNF543Q08ER8 600 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 BRDTQ58F21 947 aaPredicted RBP26.6■■□□□ 1.85
CDKN3-207ENST00000543789 SLC30A10Q6XR72 485 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 VWCEQ96DN2 955 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 THEGQ9P2T0 379 aa26.6■■□□□ 1.85
CDKN3-207ENST00000543789 ZBBXA8MT70 800 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 TNFRSF10AO00220 468 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 NKRFO15226 690 aaKnown RBP eCLIP26.59■■□□□ 1.85
CDKN3-207ENST00000543789 PFKMP08237 780 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 HAND2P61296 217 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 RPS6P62753 249 aaKnown RBP26.59■■□□□ 1.85
CDKN3-207ENST00000543789 MFSD6Q6ZSS7 791 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 ASB2Q96Q27 587 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 PCDHA11Q9Y5I1 949 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 TTC28Q96AY4 2481 aa26.59■■□□□ 1.85
CDKN3-207ENST00000543789 KPNA6O60684 536 aa26.58■■□□□ 1.85
CDKN3-207ENST00000543789 PCP11498 1178 aaKnown RBP26.58■■□□□ 1.85
CDKN3-207ENST00000543789 ATP2A2P16615 1042 aaKnown RBP26.58■■□□□ 1.85
CDKN3-207ENST00000543789 PPP2R5BQ15173 497 aa26.58■■□□□ 1.85
CDKN3-207ENST00000543789 DNERQ8NFT8 737 aa26.58■■□□□ 1.85
CDKN3-207ENST00000543789 ZMYM6O95789 1325 aa26.58■■□□□ 1.85
CDKN3-207ENST00000543789 SNHG28P0DPA3 235 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 MYOGP15173 224 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 EDNRBP24530 442 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 MRPS5P82675 430 aaKnown RBP26.57■■□□□ 1.84
CDKN3-207ENST00000543789 NMIQ13287 307 aaPredicted RBP26.57■■□□□ 1.84
CDKN3-207ENST00000543789 TTLL4Q14679 1199 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 NBPF20Q3BBV1 942 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 FAM47CQ5HY64 1035 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 PPP2R2DQ66LE6 453 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 ZNF589Q86UQ0 364 aaPredicted RBP26.57■■□□□ 1.84
CDKN3-207ENST00000543789 SCFD2Q8WU76 684 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 WDR19Q8NEZ3 1342 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 RAD50Q92878 1312 aa26.57■■□□□ 1.84
CDKN3-207ENST00000543789 B4DLN1 442 aa26.56■■□□□ 1.84
CDKN3-207ENST00000543789 MRPL12P52815 198 aaKnown RBP26.56■■□□□ 1.84
CDKN3-207ENST00000543789 RRP1P56182 461 aaKnown RBP26.56■■□□□ 1.84
CDKN3-207ENST00000543789 HDAC1Q13547 482 aaPredicted RBP26.56■■□□□ 1.84
CDKN3-207ENST00000543789 NFRKBQ6P4R8 1299 aa26.56■■□□□ 1.84
CDKN3-207ENST00000543789 DEFB128Q7Z7B8 93 aa26.56■■□□□ 1.84
CDKN3-207ENST00000543789 A6NJR5 290 aa26.55■■□□□ 1.84
CDKN3-207ENST00000543789 RNF41Q9H4P4 317 aaPredicted RBP26.55■■□□□ 1.84
CDKN3-207ENST00000543789 TRIM6-TRIM34B2RNG4 842 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 TXNP10599 105 aaKnown RBP26.54■■□□□ 1.84
CDKN3-207ENST00000543789 GPATCH4Q5T3I0 446 aaKnown RBP26.54■■□□□ 1.84
CDKN3-207ENST00000543789 RETREG2Q8NC44 543 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 RGS22Q8NE09 1264 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 COPS5Q92905 334 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 CRBNQ96SW2 442 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 CCDC171Q6TFL3 1326 aa26.54■■□□□ 1.84
CDKN3-207ENST00000543789 ACTN1P12814 892 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 RFC2P35250 354 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 PTPN11Q06124 597 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms