RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 TRIM43BA6NCK2 446 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 SOX1O00570 391 aaPredicted RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 NFIBO00712 420 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 KIAA0355O15063 1070 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
NUP43-206ENST00000543637 CHMLP26374 656 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 PDE4AP27815 886 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 CPT1AP50416 773 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 BEX3Q00994 111 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 FPGSQ05932 587 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 SHHQ15465 462 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 CDC37Q16543 378 aaPredicted RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 CCSAPQ6IQ19 270 aaPredicted RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 RASGRP2Q7LDG7 609 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 ADGRF4Q8IZF3 695 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
NUP43-206ENST00000543637 WDR11Q9BZH6 1224 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 PDGFCQ9NRA1 345 aa8.35□□□□□ -1.07
NUP43-206ENST00000543637 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 KPNA6O60684 536 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 TIMP1P01033 207 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 SMPD1P17405 629 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 CDK7P50613 346 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 RPS6P62753 249 aaKnown RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.076e-6■□□□□ 9.4
NUP43-206ENST00000543637 ITGA7Q13683 1181 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 WTAPQ15007 396 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 DUSP28Q4G0W2 176 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 FAM109BQ6ICB4 259 aaPredicted RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 TAPT1Q6NXT6 567 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 FBXO16Q8IX29 292 aaPredicted RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 MORC4Q8TE76 937 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 NSUN6Q8TEA1 469 aaKnown RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 FGD4Q96M96 766 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 AMNQ9BXJ7 453 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 KATNBL1Q9H079 304 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 GNEQ9Y223 722 aaKnown RBP8.34□□□□□ -1.07
NUP43-206ENST00000543637 LCTP09848 1927 aa8.34□□□□□ -1.07
NUP43-206ENST00000543637 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 MYADML2A6NDP7 307 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 CFBP00751 764 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 MYL3P08590 195 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 SUPT20HL2P0C7V6 817 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 TXNP10599 105 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 GSPT1P15170 499 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 NKX3-2P78367 333 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 TTLL4Q14679 1199 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 PPP2R5BQ15173 497 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 STXBP2Q15833 593 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 QRICH1Q2TAL8 776 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 ARHGEF16Q5VV41 709 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 CASC1Q6TDU7 716 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 CXCL17Q6UXB2 119 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 RPUSD2Q8IZ73 545 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 TMTC2Q8N394 836 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 SLC17A8Q8NDX2 589 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 OR6J1Q8NGC5 347 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 SCFD2Q8WU76 684 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 CLEC4DQ8WXI8 215 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 PURBQ96QR8 312 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 IWS1Q96ST2 819 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 MTIF3Q9H2K0 278 aaKnown RBP8.33□□□□□ -1.08
NUP43-206ENST00000543637 CPVLQ9H3G5 476 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
NUP43-206ENST00000543637 RBM47A0AV96 593 aaKnown RBP8.32□□□□□ -1.08
NUP43-206ENST00000543637 E7EWF7 191 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 ZBTB5O15062 677 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 SGSM2O43147 1006 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 ADCY6O43306 1168 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 FGBP02675 491 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 CYP21A2P08686 494 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 IRX5P78411 483 aaPredicted RBP8.32□□□□□ -1.08
NUP43-206ENST00000543637 SMAD3P84022 425 aaKnown RBP8.32□□□□□ -1.08
NUP43-206ENST00000543637 PTH1RQ03431 593 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 SLC30A10Q6XR72 485 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 SEPT14Q6ZU15 432 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 Q7L0L9 218 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 MAP4K1Q92918 833 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 TAAR1Q96RJ0 339 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 RMDN3Q96TC7 470 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 MTMR10Q9NXD2 777 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 LRRC37A2A6NM11 1700 aa8.32□□□□□ -1.08
NUP43-206ENST00000543637 CCDC69A6NI79 296 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 GH1P01241 217 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 CASTP20810 708 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms