RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PCDHA12Q9UN75 941 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 LARGE1O95461 756 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
TRIM59-208ENST00000543469 FCER1AP12319 257 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 MSNP26038 577 aaKnown RBP8.97□□□□□ -0.97
TRIM59-208ENST00000543469 KRT76Q01546 638 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 STXBP2Q15833 593 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 NRBP2Q9NSY0 501 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 TIAM2Q8IVF5 1701 aa8.97□□□□□ -0.97
TRIM59-208ENST00000543469 NOP56O00567 594 aaKnown RBP8.96□□□□□ -0.97
TRIM59-208ENST00000543469 CLSTN1O94985 981 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 CETN1Q12798 172 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 ALCAMQ13740 583 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 NBPF12Q5TAG4 269 aaPredicted RBP8.96□□□□□ -0.97
TRIM59-208ENST00000543469 MIS18BP1Q6P0N0 1132 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 SPICE1Q8N0Z3 855 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 TIPINQ9BVW5 301 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 LUC7LQ9NQ29 371 aaKnown RBP8.96□□□□□ -0.97
TRIM59-208ENST00000543469 PCDHA6Q9UN73 950 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 PCDHA8Q9Y5H6 950 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 VWA3AA6NCI4 1184 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 FAM13AO94988 1023 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 SMTNP53814 917 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 NEDD9Q14511 834 aa8.96□□□□□ -0.97
TRIM59-208ENST00000543469 SNRNP48Q6IEG0 339 aaKnown RBP8.96□□□□□ -0.97
TRIM59-208ENST00000543469 IGKV6D-41A0A0C4DH26 115 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 STXBP3O00186 592 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
TRIM59-208ENST00000543469 MAPK4P31152 587 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 HMGCS2P54868 508 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 INF2Q27J81 1249 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 LRSAM1Q6UWE0 723 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 NIPA1Q7RTP0 329 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 DPP9Q86TI2 863 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 MLKLQ8NB16 471 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 SHCBP1Q8NEM2 672 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 GOLGA5Q8TBA6 731 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 TBCKQ8TEA7 893 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 RRAGCQ9HB90 399 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 ARHGEF35A5YM69 484 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 NMT2O60551 498 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 GAP43P17677 238 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 RPL13P26373 211 aaKnown RBP8.96□□□□□ -0.98
TRIM59-208ENST00000543469 DSG3P32926 999 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF157P51786 506 aaPredicted RBP8.96□□□□□ -0.98
TRIM59-208ENST00000543469 HUNKP57058 714 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 ELOA2Q8IYF1 753 aaPredicted RBP8.96□□□□□ -0.98
TRIM59-208ENST00000543469 GPRC5AQ8NFJ5 357 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 IQCDQ96DY2 449 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 MMP19Q99542 508 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 KCNQ5Q9NR82 932 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 PPME1Q9Y570 386 aa8.96□□□□□ -0.98
TRIM59-208ENST00000543469 CCL15-CCL14A0A0B4J2E2 113 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 MARCKSP29966 332 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 SLC16A2P36021 539 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 DNM2P50570 870 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 CCDC173Q0VFZ6 552 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PDIA5Q14554 519 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 GRIK5Q16478 980 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 CCL15Q16663 113 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 FKBP15Q5T1M5 1219 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 LINC00301Q8NCQ3 95 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 ZBED3Q96IU2 234 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 IFT74Q96LB3 600 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PDGFDQ9GZP0 370 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 NAV1Q8NEY1 1877 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 BACH1O14867 736 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PTPRAP18433 802 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 KLRG1Q96E93 195 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 AGTPBP1Q9UPW5 1226 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 CHD4Q14839 1912 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 CD2BP2O95400 341 aaKnown RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 SNHG28P0DPA3 235 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 TXKP42681 527 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 ASIC1P78348 528 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 USP28Q96RU2 1077 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 DACT1Q9NYF0 836 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF112Q9UJU3 913 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PES1O00541 588 aaKnown RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 GTPBP6O43824 516 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 RPLP2P05387 115 aaKnown RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PSAPP07602 524 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 PPP2R5AQ15172 486 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 DNERQ8NFT8 737 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
TRIM59-208ENST00000543469 RANBP17Q9H2T7 1088 aaKnown RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
TRIM59-208ENST00000543469 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 STRNO43815 780 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 LRCH2Q5VUJ6 765 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 TRPM4Q8TD43 1214 aa8.94□□□□□ -0.98
TRIM59-208ENST00000543469 ZNF577Q9BSK1 485 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms