RNA–Protein interactions for RNA: ENST00000543460.1

C16orf62-217, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 2

Gene C16orf62, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-217ENST00000543460 SMCHD1A6NHR9 2005 aa11.24□□□□□ -0.61
C16orf62-217ENST00000543460 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 OPLAHO14841 1288 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 ADCY3O60266 1144 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 RXRAP19793 462 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 EDNRBP24530 442 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 GRK4P32298 578 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 CCT2P78371 535 aaKnown RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 PRKCZQ05513 592 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 DAGLBQ8NCG7 672 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 TMX3Q96JJ7 454 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 EHMT1Q9H9B1 1298 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
C16orf62-217ENST00000543460 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
C16orf62-217ENST00000543460 STXBP3O00186 592 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 NFIBO00712 420 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 MAFGO15525 162 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 MSCO60682 206 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 COBLO75128 1261 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
C16orf62-217ENST00000543460 UBXN2AP68543 259 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 TINF2Q9BSI4 451 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
C16orf62-217ENST00000543460 NCOA5Q9HCD5 579 aaKnown RBP11.22□□□□□ -0.61
C16orf62-217ENST00000543460 RPTORQ8N122 1335 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
C16orf62-217ENST00000543460 MEIS2O14770 477 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 CTDNEP1O95476 244 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 TGFB3P10600 412 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 NAPAP54920 295 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 CAP1Q01518 475 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
C16orf62-217ENST00000543460 USH1GQ495M9 461 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 KCNV1Q6PIU1 500 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
C16orf62-217ENST00000543460 NSMFQ6X4W1 530 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
C16orf62-217ENST00000543460 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
C16orf62-217ENST00000543460 GABRQQ9UN88 632 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 Q9Y3F1 56 aa11.21□□□□□ -0.61
C16orf62-217ENST00000543460 LCTP09848 1927 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 RBM47A0AV96 593 aaKnown RBP11.2□□□□□ -0.62
C16orf62-217ENST00000543460 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
C16orf62-217ENST00000543460 PDCP20941 246 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 ADCY7P51828 1080 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 NKX3-2P78367 333 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 STK3Q13188 491 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 CMTR1Q8N1G2 835 aaKnown RBP11.2□□□□□ -0.62
C16orf62-217ENST00000543460 CCDC82Q8N4S0 544 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 PHKBQ93100 1093 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 PTCH2Q9Y6C5 1203 aa11.2□□□□□ -0.62
C16orf62-217ENST00000543460 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
C16orf62-217ENST00000543460 PEX10O60683 326 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 EIF3JO75822 258 aaKnown RBP11.19□□□□□ -0.62
C16orf62-217ENST00000543460 LARGE1O95461 756 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 CFBP00751 764 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 CYP3A4P08684 503 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
C16orf62-217ENST00000543460 USP11P51784 963 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 SNAP25P60880 206 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 STXBP2Q15833 593 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 PCNX4Q63HM2 1172 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 MOXD1Q6UVY6 613 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 VSIG10LQ86VR7 867 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 REXO1Q8N1G1 1221 aaKnown RBP11.19□□□□□ -0.62
C16orf62-217ENST00000543460 NPLOC4Q8TAT6 608 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 CDHR1Q96JP9 859 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 FGD4Q96M96 766 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
C16orf62-217ENST00000543460 NAP1L4Q99733 375 aaKnown RBP11.19□□□□□ -0.62
C16orf62-217ENST00000543460 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms