RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	MYO7A	Q13402	2215 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324		A0A0U1RQG5	324 aa	Predicted RBP	7.75	□□□□□ -1.17
CIT-213	ENST00000543324	NCK2	O43639	380 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	CNMD	O75829	334 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	PTPRO	Q16827	1216 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	CERS3	Q8IU89	383 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.75	□□□□□ -1.17
CIT-213	ENST00000543324	TEX11	Q8IYF3	940 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	CCDC105	Q8IYK2	499 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	RHPN1	Q8TCX5	695 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	SCLY	Q96I15	445 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	RIOK1	Q9BRS2	568 aa	Known RBP	7.75	□□□□□ -1.17
CIT-213	ENST00000543324	WDR18	Q9BV38	432 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.75	□□□□□ -1.17
CIT-213	ENST00000543324	ANTXR1	Q9H6X2	564 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	CACNA2D2	Q9NY47	1150 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CIT-213	ENST00000543324	LRP2BP	Q9P2M1	347 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	PI4KB	Q9UBF8	816 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	IVNS1ABP	Q9Y6Y0	642 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	MYH4	Q9Y623	1939 aa		7.75	□□□□□ -1.17
CIT-213	ENST00000543324	ZNFX1	Q9P2E3	1918 aa	Known RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	TCRBV5S4A2T	A0A5A2	114 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	LINC01553	A4QN01	128 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	TBX10	O75333	385 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	EYA4	O95677	639 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	ACTN1	P12814	892 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	CCNA1	P78396	465 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	ZNF200	P98182	395 aa	Predicted RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	OS9	Q13438	667 aa	Predicted RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	KCNA10	Q16322	511 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	HSP90AB4P	Q58FF6	505 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	C20orf194	Q5TEA3	1177 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	WDR78	Q5VTH9	848 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	TATDN1	Q6P1N9	297 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	SUMF1	Q8NBK3	374 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	LENG1	Q96BZ8	264 aa	Predicted RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	AGBL1	Q96MI9	1066 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	EHD4	Q9H223	541 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	NSUN3	Q9H649	340 aa	Known RBP	7.74	□□□□□ -1.17
CIT-213	ENST00000543324	GINM1	Q9NU53	330 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	NRBP1	Q9UHY1	535 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	CD207	Q9UJ71	328 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	RCAN3	Q9UKA8	241 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	COG6	Q9Y2V7	657 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	SYNRG	Q9UMZ2	1314 aa		7.74	□□□□□ -1.17
CIT-213	ENST00000543324	BAG3	O95817	575 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	DYNLL1	P63167	89 aa	Known RBP	7.73	□□□□□ -1.17
CIT-213	ENST00000543324	GABPA	Q06546	454 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	LARP1B	Q659C4	914 aa	Known RBP	7.73	□□□□□ -1.17
CIT-213	ENST00000543324	DPP9	Q86TI2	863 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	AACS	Q86V21	672 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	FBXO22	Q8NEZ5	403 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	TGFBRAP1	Q8WUH2	860 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	KIF1BP	Q96EK5	621 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	PALD1	Q9ULE6	856 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	RABGAP1	Q9Y3P9	1069 aa		7.73	□□□□□ -1.17
CIT-213	ENST00000543324	USP17L5	A8MUK1	530 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	RAB11FIP3	O75154	756 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	ASNS	P08243	561 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	PDE6A	P16499	860 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	CYP7A1	P22680	504 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	CST5	P28325	142 aa	Predicted RBP	7.72	□□□□□ -1.17
CIT-213	ENST00000543324	ADORA2A	P29274	412 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	RBM25	P49756	843 aa	Known RBP	7.72	□□□□□ -1.17
CIT-213	ENST00000543324	CWF19L1	Q69YN2	538 aa	Known RBP	7.72	□□□□□ -1.17
CIT-213	ENST00000543324	ZC3H14	Q6PJT7	736 aa	Known RBP	7.72	□□□□□ -1.17
CIT-213	ENST00000543324	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.72	□□□□□ -1.17
CIT-213	ENST00000543324	MAPKAPK5	Q8IW41	473 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	MAGEB6	Q8N7X4	407 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	C12orf42	Q96LP6	360 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	IL1RAPL2	Q9NP60	686 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	ZBTB21	Q9ULJ3	1066 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	ADAMTS20	P59510	1910 aa		7.72	□□□□□ -1.17
CIT-213	ENST00000543324	LAMA4	Q16363	1823 aa		7.71	□□□□□ -1.17
CIT-213	ENST00000543324	TANC1	Q9C0D5	1861 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	MYADML2	A6NDP7	307 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	TMEM8B	A6NDV4	472 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	SLC30A4	O14863	429 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	COBL	O75128	1261 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	HMMR	O75330	724 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	IDH1	O75874	414 aa	Known RBP	7.71	□□□□□ -1.18
CIT-213	ENST00000543324	ASGR1	P07306	291 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	AR	P10275	920 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	AKR1A1	P14550	325 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	ATP5J	P18859	108 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	GUCY1A2	P33402	732 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	SHMT1	P34896	483 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	BACE1	P56817	501 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	TTF1	Q15361	905 aa	Predicted RBP	7.71	□□□□□ -1.18
CIT-213	ENST00000543324	DEFB128	Q7Z7B8	93 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	CLASRP	Q8N2M8	674 aa	Known RBP	7.71	□□□□□ -1.18
CIT-213	ENST00000543324	MIGA1	Q8NAN2	632 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	DTWD2	Q8NBA8	298 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	SLC43A3	Q8NBI5	491 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	TET1	Q8NFU7	2136 aa		7.71	□□□□□ -1.18
CIT-213	ENST00000543324	SP7	Q8TDD2	431 aa	Predicted RBP	7.71	□□□□□ -1.18
CIT-213	ENST00000543324	KIF12	Q96FN5	646 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms