RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
C2CD3-219ENST00000542930 TANC1Q9C0D5 1861 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 MBD4O95243 580 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 MYL3P08590 195 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 DEFB103AP81534 67 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 AACSQ86V21 672 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 MRPL38Q96DV4 380 aaKnown RBP11.25□□□□□ -0.61
C2CD3-219ENST00000542930 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
C2CD3-219ENST00000542930 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
C2CD3-219ENST00000542930 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 GOLIM4O00461 696 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 IRS1P35568 1242 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 GPNMBQ14956 572 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 PKN1Q16512 942 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 PTPROQ16827 1216 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 BRDTQ58F21 947 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-219ENST00000542930 HERC4Q5GLZ8 1057 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-219ENST00000542930 CNKSR3Q6P9H4 555 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 BMP8AQ7Z5Y6 402 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-219ENST00000542930 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 CAGE1Q8TC20 777 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 AFAP1L1Q8TED9 768 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 MKL1Q969V6 931 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 PABPC5Q96DU9 382 aaKnown RBP11.24□□□□□ -0.61
C2CD3-219ENST00000542930 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 BAZ2AQ9UIF9 1905 aaKnown RBP11.24□□□□□ -0.61
C2CD3-219ENST00000542930 SPTBN4Q9H254 2564 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
C2CD3-219ENST00000542930 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
C2CD3-219ENST00000542930 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 KPNA6O60684 536 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 EFCAB14O75071 495 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
C2CD3-219ENST00000542930 ADD2P35612 726 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 TIGD5Q53EQ6 642 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 IER5LQ5T953 404 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 TRERF1Q96PN7 1200 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 SIP14410 1827 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 DMDP11532 3685 aa11.23□□□□□ -0.61
C2CD3-219ENST00000542930 IGKV6D-41A0A0C4DH26 115 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 GFRA3O60609 400 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 CXCL10P02778 98 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 BMP3P12645 472 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 RASA1P20936 1047 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 ERC1Q8IUD2 1116 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 GMCL1P1Q8NEA9 526 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 OR6J1Q8NGC5 347 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 EDAQ92838 391 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 RAD50Q92878 1312 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 DCHS1Q96JQ0 3298 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 DNAJC2Q99543 621 aaKnown RBP11.22□□□□□ -0.61
C2CD3-219ENST00000542930 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
C2CD3-219ENST00000542930 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 ARPP21Q9UBL0 812 aaPredicted RBP11.22□□□□□ -0.61
C2CD3-219ENST00000542930 MUTYHQ9UIF7 546 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
C2CD3-219ENST00000542930 TECTAO75443 2155 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
C2CD3-219ENST00000542930 A6NJR5 290 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 ALAS1P13196 640 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 SELPP16109 830 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 STAT2P52630 851 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 RBL2Q08999 1139 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 TCF15Q12870 199 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 IKBKEQ14164 716 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
C2CD3-219ENST00000542930 PTGISQ16647 500 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 LRRC8DQ7L1W4 858 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 PPP1R13LQ8WUF5 828 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 CHURC1Q8WUH1 139 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
C2CD3-219ENST00000542930 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 SAMD11Q96NU1 681 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
C2CD3-219ENST00000542930 NKRFO15226 690 aaKnown RBP eCLIP11.2□□□□□ -0.62
C2CD3-219ENST00000542930 NCK2O43639 380 aa11.2□□□□□ -0.62
C2CD3-219ENST00000542930 NBNO60934 754 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms