RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 CPT1AP50416 773 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 ADGRE1Q14246 886 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 CCDC85BQ15834 202 aaPredicted RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 BRDTQ58F21 947 aaPredicted RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 PURBQ96QR8 312 aaKnown RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 WNT8AQ9H1J5 351 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
RTN3-211ENST00000542238 NCOR1O75376 2440 aa18.2■□□□□ 0.5
RTN3-211ENST00000542238 FOXP2O15409 715 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 PFKMP08237 780 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
RTN3-211ENST00000542238 SLC16A2P36021 539 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 NOVP48745 357 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 MRPS5P82675 430 aaKnown RBP18.19■□□□□ 0.5
RTN3-211ENST00000542238 TMEM63BQ5T3F8 832 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 SYDE2Q5VT97 1194 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 BTNL9Q6UXG8 535 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 SCLYQ96I15 445 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 PCDHA11Q9Y5I1 949 aa18.19■□□□□ 0.5
RTN3-211ENST00000542238 MYL3P08590 195 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 RABGGTBP53611 331 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 ALX1Q15699 326 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 RRP12Q5JTH9 1297 aaKnown RBP18.18■□□□□ 0.5
RTN3-211ENST00000542238 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 PPP2R2DQ66LE6 453 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 TNKSO95271 1327 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 RAD50Q92878 1312 aa18.18■□□□□ 0.5
RTN3-211ENST00000542238 NFIBO00712 420 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 FGRP09769 529 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 ATP2A2P16615 1042 aaKnown RBP18.17■□□□□ 0.5
RTN3-211ENST00000542238 CALML3P27482 149 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 PURAQ00577 322 aaKnown RBP18.17■□□□□ 0.5
RTN3-211ENST00000542238 RNF207Q6ZRF8 634 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 OR6J1Q8NGC5 347 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 TMEM47Q9BQJ4 181 aa18.17■□□□□ 0.5
RTN3-211ENST00000542238 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
RTN3-211ENST00000542238 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
RTN3-211ENST00000542238 FRMPD2Q68DX3 1309 aaPredicted RBP18.17■□□□□ 0.5
RTN3-211ENST00000542238 RBM47A0AV96 593 aaKnown RBP18.16■□□□□ 0.5
RTN3-211ENST00000542238 B4DLN1 442 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
RTN3-211ENST00000542238 CYP2C9P11712 490 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 ACTN1P12814 892 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
RTN3-211ENST00000542238 PDE4DQ08499 809 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 FAM47CQ5HY64 1035 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 DEFB128Q7Z7B8 93 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 ADAMTS19Q8TE59 1207 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 SCN5AQ14524 2016 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 BDP1A6H8Y1 2624 aa18.16■□□□□ 0.5
RTN3-211ENST00000542238 KPNA6O60684 536 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 FGAP02671 866 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 PPP2R5BQ15173 497 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 SLC30A10Q6XR72 485 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 SCFD2Q8WU76 684 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 SCN10AQ9Y5Y9 1956 aa18.15■□□□□ 0.5
RTN3-211ENST00000542238 MYOGP15173 224 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 RFC2P35250 354 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 TTLL4Q14679 1199 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 NBPF20Q3BBV1 942 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 CLEC4DQ8WXI8 215 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 TTC14Q96N46 770 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 UHRF1Q96T88 793 aaPredicted RBP18.14■□□□□ 0.49
RTN3-211ENST00000542238 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
RTN3-211ENST00000542238 PDHBP11177 359 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 RPS6P62753 249 aaKnown RBP18.13■□□□□ 0.49
RTN3-211ENST00000542238 NFRKBQ6P4R8 1299 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 VWCEQ96DN2 955 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 NOD1Q9Y239 953 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 WDR19Q8NEZ3 1342 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 CHD7Q9P2D1 2997 aa18.13■□□□□ 0.49
RTN3-211ENST00000542238 A6NJR5 290 aa18.12■□□□□ 0.49
RTN3-211ENST00000542238 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
RTN3-211ENST00000542238 TXNP10599 105 aaKnown RBP18.12■□□□□ 0.49
RTN3-211ENST00000542238 HSPD1P10809 573 aaKnown RBP18.12■□□□□ 0.49
RTN3-211ENST00000542238 PCP11498 1178 aaKnown RBP18.12■□□□□ 0.49
RTN3-211ENST00000542238 COL9A1P20849 921 aa18.12■□□□□ 0.49
RTN3-211ENST00000542238 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
RTN3-211ENST00000542238 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms