RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RSPH1Q8WYR4 309 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 ZNF516Q92618 1163 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 GOLGA1Q92805 767 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 NMRK2Q9NPI5 230 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 SAP30BPQ9UHR5 308 aaKnown RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 CYP8B1Q9UNU6 501 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 DIS3Q9Y2L1 958 aaKnown RBP6.55□□□□□ -1.36
DDB1-219ENST00000541513 TTLL3Q9Y4R7 772 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 GJA3Q9Y6H8 435 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 KIAA1210Q9ULL0 1709 aa6.55□□□□□ -1.36
DDB1-219ENST00000541513 FAM170AA1A519 330 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 KPNA6O60684 536 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 EFCAB14O75071 495 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 CAPNS1P04632 268 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
DDB1-219ENST00000541513 MYBL2P10244 700 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 CAPN3P20807 821 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 CCND1P24385 295 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 GRNP28799 593 aaKnown RBP6.54□□□□□ -1.36
DDB1-219ENST00000541513 IGFALSP35858 605 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 FLT3P36888 993 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 TSPAN7P41732 249 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 ID4P47928 161 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
DDB1-219ENST00000541513 PRKG2Q13237 762 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 ZNF460Q14592 562 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 SPECC1Q5M775 1068 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 YOD1Q5VVQ6 348 aaPredicted RBP6.54□□□□□ -1.36
DDB1-219ENST00000541513 ARMC3Q5W041 872 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 TLDC1Q6P9B6 456 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 UNC5AQ6ZN44 842 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 CATIPQ7Z7H3 387 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 KIF18BQ86Y91 864 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 ZNF280CQ8ND82 737 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 SLC7A14Q8TBB6 771 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 YTHDC1Q96MU7 727 aaKnown RBP6.54□□□□□ -1.36
DDB1-219ENST00000541513 SIN3AQ96ST3 1273 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 EFCC1Q9HA90 598 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 RSAD1Q9HA92 442 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 GPR52Q9Y2T5 361 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
DDB1-219ENST00000541513 PIK3C2GO75747 1445 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ADAMTS13Q76LX8 1427 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 OPA1O60313 960 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 XYLBO75191 536 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 MTA2O94776 668 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ZBED1O96006 694 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 HSPA6P17066 643 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 IARSP41252 1262 aaKnown RBP6.53□□□□□ -1.36
DDB1-219ENST00000541513 GRM5P41594 1212 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 CLK1P49759 484 aaKnown RBP6.53□□□□□ -1.36
DDB1-219ENST00000541513 ZBED6P86452 979 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 BTKQ06187 659 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ZYXQ15942 572 aaKnown RBP6.53□□□□□ -1.36
DDB1-219ENST00000541513 ATP13A4Q4VNC1 1196 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 PPP1R26Q5T8A7 1209 aaPredicted RBP6.53□□□□□ -1.36
DDB1-219ENST00000541513 KIAA1211LQ6NV74 962 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 CCDC116Q8IYX3 515 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 MPNDQ8N594 471 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 GAL3ST3Q96A11 431 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 NELL2Q99435 816 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 UNC45AQ9H3U1 944 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ANTXR1Q9H6X2 564 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 KMT5AQ9NQR1 393 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 SH3GLB2Q9NR46 395 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 SMYD2Q9NRG4 433 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 AAASQ9NRG9 546 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 ALKQ9UM73 1620 aa6.53□□□□□ -1.36
DDB1-219ENST00000541513 NWD1Q149M9 1564 aa6.52□□□□□ -1.36
DDB1-219ENST00000541513 STRCP1A6NGW2 1772 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 hCG_1642624A0A1W2PR95 340 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 TTC36A6NLP5 189 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 CLGNO14967 610 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 HNRNPCP07910 306 aaKnown RBP eCLIP6.52□□□□□ -1.37
DDB1-219ENST00000541513 JMJD7P0C870 316 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 ACRP10323 421 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 NAT2P11245 290 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 BMP6P22004 513 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 APBA1Q02410 837 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 KLF1Q13351 362 aaPredicted RBP6.52□□□□□ -1.37
DDB1-219ENST00000541513 KIF22Q14807 665 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 NBPF8Q3BBV2 869 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 RC3H1Q5TC82 1133 aaKnown RBP6.52□□□□□ -1.37
DDB1-219ENST00000541513 RASIP1Q5U651 963 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 CHCHD4Q8N4Q1 142 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 DEPTORQ8TB45 409 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 SLC35G2Q8TBE7 412 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 CCT6BQ92526 530 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 TAAR9Q96RI9 348 aa6.52□□□□□ -1.37
DDB1-219ENST00000541513 EIF2AK1Q9BQI3 630 aaKnown RBP6.52□□□□□ -1.37
DDB1-219ENST00000541513 CRB3Q9BUF7 120 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms