RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 CAGE1Q8TC20 777 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 COG1Q8WTW3 980 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 ZNF622Q969S3 477 aaKnown RBP eCLIP11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 THAP9Q9H5L6 903 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 NHEJ1Q9H9Q4 299 aaPredicted RBP11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.52
PHACTR3-209ENST00000541461 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 KRT86O43790 486 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 SRGNP10124 158 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 CYP2D6P10635 497 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 C2orf54Q08AI8 447 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 GRAPQ13588 217 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 MEA1Q16626 185 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 MAP9Q49MG5 647 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 BSDC1Q9NW68 430 aaPredicted RBP11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
PHACTR3-209ENST00000541461 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 DNM2P50570 870 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 CCNI2Q6ZMN8 369 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 TUBGCP2Q9BSJ2 902 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 JADE2Q9NQC1 790 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 EXOC1Q9NV70 894 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 ZNF804BA4D1E1 1349 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 AGPSO00116 658 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 PSMA7O14818 248 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 IDEP14735 1019 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 MCM3P25205 808 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 DTHD1Q6ZMT9 781 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 GIMAP8Q8ND71 665 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 SMCR8Q8TEV9 937 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 PCMTD1Q96MG8 357 aaPredicted RBP11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 SELENOOQ9BVL4 669 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
PHACTR3-209ENST00000541461 H0YIN7 160 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 RHOBTB3O94955 611 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 KLRK1P26718 216 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 KCNB1Q14721 858 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 ZNHIT6Q9NWK9 470 aaKnown RBP11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 MYH10P35580 1976 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 A0A1B0GUL6 1792 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 ORC4O43929 436 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 PPFIA4O75335 1185 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 PLEKP08567 350 aaPredicted RBP11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 NPR1P16066 1061 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 UBA7P41226 1012 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 MRPS25P82663 173 aaKnown RBP11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 INF2Q27J81 1249 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 KRT26Q7Z3Y9 468 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 RPGRIP1Q96KN7 1286 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 LRWD1Q9UFC0 647 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
PHACTR3-209ENST00000541461 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 ZNF263O14978 683 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 PCP11498 1178 aaKnown RBP11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 CALML3P27482 149 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 MAGEA9P43362 315 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 ZBED6P86452 979 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 HDAC7Q8WUI4 952 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 KBTBD4Q9NVX7 518 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
PHACTR3-209ENST00000541461 IPO7O95373 1038 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms