RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 MYO1BO43795 1136 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 ACTN2P35609 894 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 FKBP1AP62942 108 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 PPARDQ03181 441 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 SPECC1LQ69YQ0 1117 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 ZNF444Q8N0Y2 327 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 VPS33BQ9H267 617 aa16.1■□□□□ 0.17
SFSWAP-210ENST00000541286 VWA3AA6NCI4 1184 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 ARHGAP6O43182 974 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 GH2P01242 217 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 IFNAR1P17181 557 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 TTC31Q49AM3 519 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 NUP88Q99567 741 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 HTTP42858 3142 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 CDC25AP30304 524 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 ECE1P42892 770 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 RASSF8Q8NHQ8 419 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 GOLGA5Q8TBA6 731 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 IDI2Q9BXS1 227 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■■■■■ 34
SFSWAP-210ENST00000541286 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
SFSWAP-210ENST00000541286 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 SNAP25P60880 206 aa16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 GABPAQ06546 454 aa16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 EEF2KMTQ96G04 330 aa16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 EIF3CQ99613 913 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-210ENST00000541286 DEXIO95424 95 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 PTPREP23469 700 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 LIFRP42702 1097 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 ESR2Q92731 530 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
SFSWAP-210ENST00000541286 TRIM75PA6NK02 468 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 SBK1Q52WX2 424 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 KRT26Q7Z3Y9 468 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 ACER1Q8TDN7 264 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 FRMPD2Q68DX3 1309 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 IGSF22Q8N9C0 903 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 TAF1DQ9H5J8 278 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 FAM193AP78312 1265 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 AMOTL1Q8IY63 956 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 TC2NQ8N9U0 490 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 PLIN2Q99541 437 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
SFSWAP-210ENST00000541286 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 SYMPKQ92797 1274 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 PEX10O60683 326 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 XBP1P17861 261 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 KIAA1755Q5JYT7 1200 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 MICALL1Q8N3F8 863 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 MLKLQ8NB16 471 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 PNKPQ96T60 521 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 VPS16Q9H269 839 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 A0A1W2PRG0 241 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 WNT7AO00755 349 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 SEC23AQ15436 765 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 FAM151AQ8WW52 585 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 RIN2Q8WYP3 895 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 MRPL44Q9H9J2 332 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 VAT1LQ9HCJ6 419 aa16.06■□□□□ 0.16
SFSWAP-210ENST00000541286 A0A087X0B3 334 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 MCM7P33993 719 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 RBL2Q08999 1139 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 TICAM2Q86XR7 235 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 CLMNQ96JQ2 1002 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 MED15Q96RN5 788 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 ADARB2Q9NS39 739 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms