RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MAST3O60307 1309 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 LARGE1O95461 756 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 CNGA1P29973 690 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 CDAN1Q8IWY9 1227 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 DRP2Q13474 957 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 SRLQ86TD4 932 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 RASGRF2O14827 1237 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 SERPING1P05155 500 aa16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-207ENST00000541122 MOCS3O95396 460 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 MMP1P03956 469 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 CCNE1P24864 410 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 TRIM11Q96F44 468 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 FMO2Q99518 471 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 PFDN4Q9NQP4 134 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ECEL1O95672 775 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 DYNC1I2Q13409 638 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ATP1A3P13637 1013 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ESRRGP62508 458 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ST13P4Q8IZP2 240 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 EYA3Q99504 573 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 FGFR1OP2Q9NVK5 253 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 CIAO1O76071 339 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 GYS2P54840 703 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 PLTPP55058 493 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 POLE2P56282 527 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 PDCLQ13371 301 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 DRC3Q9H069 523 aa16.31■□□□□ 0.2
SMARCA4-207ENST00000541122 HAUS8Q9BT25 410 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 ARHGEF10LQ9HCE6 1279 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 PCDHA12Q9UN75 941 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 DAPK3O43293 454 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 EIF4A3P38919 411 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 BFSP1Q12934 665 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 TEKT1Q969V4 418 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 MRFAP1Q9Y605 127 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 DCTN3O75935 186 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 KIF11P52732 1056 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 TARSL2A2RTX5 802 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 MAPK13O15264 365 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 MGEA5O60502 916 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 VPS41P49754 854 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 AOC3Q16853 763 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 TCP11X2Q5H9J9 407 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
SMARCA4-207ENST00000541122 FTOQ9C0B1 505 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■□□ 16.1
SMARCA4-207ENST00000541122 IFNAR1P17181 557 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 SLC1A4P43007 532 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 RESP18Q5W5W9 173 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 RNF8O76064 485 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 GGCXP38435 758 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 TOGARAM2Q6ZUX3 1019 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 MB21D1Q8N884 522 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 VIPAS39Q9H9C1 493 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 PLAAQ9Y263 795 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 CYP2J2P51589 502 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 C1orf112Q9NSG2 853 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 DBNLQ9UJU6 430 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 ZNF148Q9UQR1 794 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 GARSP41250 739 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 BPIFB4P59827 614 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 CCDC144BQ3MJ40 725 aa16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 TBC1D1Q86TI0 1168 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-207ENST00000541122 PLEKHG3A1L390 1219 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 TADA3O75528 432 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 AFPP02771 609 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 INHBAP08476 426 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 KRT31Q15323 416 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 CREB3O43889 395 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 PSMD2Q13200 908 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 MIS12Q9H081 205 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 A0A087WWV3 80 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms