RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CALML3P27482 149 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 JAKMIP1Q96N16 626 aaKnown RBP15.21■□□□□ 0.03
LTBR-208ENST00000541005 PURBQ96QR8 312 aaKnown RBP15.21■□□□□ 0.03
LTBR-208ENST00000541005 PIGSQ96S52 555 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 USP26Q9BXU7 913 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 VTA1Q9NP79 307 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 NID2Q14112 1375 aa15.21■□□□□ 0.02
LTBR-208ENST00000541005 ADCY6O43306 1168 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 ADAMTS4O75173 837 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
LTBR-208ENST00000541005 HSD17B4P51659 736 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 NKX3-2P78367 333 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 LRRC41Q15345 812 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 CCDC144BQ3MJ40 725 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 BLOC1S2Q6QNY1 142 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 FANCBQ8NB91 859 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 SYTL5Q8TDW5 730 aaPredicted RBP15.2■□□□□ 0.02
LTBR-208ENST00000541005 TCEANC2Q96MN5 208 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
LTBR-208ENST00000541005 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
LTBR-208ENST00000541005 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
LTBR-208ENST00000541005 SYNRGQ9UMZ2 1314 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 PLEKHA8P1O95397 391 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 RXRAP19793 462 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 RPS6KB1P23443 525 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 PSMA5P28066 241 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 CST5P28325 142 aaPredicted RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 SRBD1Q8N5C6 995 aaKnown RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 LENG1Q96BZ8 264 aaPredicted RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 RBM28Q9NW13 759 aaKnown RBP15.19■□□□□ 0.02
LTBR-208ENST00000541005 COL20A1Q9P218 1284 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 PHF24Q9UPV7 400 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 TRIOBPQ9H2D6 2365 aa15.19■□□□□ 0.02
LTBR-208ENST00000541005 SCN10AQ9Y5Y9 1956 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 KBTBD13C9JR72 458 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
LTBR-208ENST00000541005 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 RNF180Q86T96 592 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 FBXO16Q8IX29 292 aaPredicted RBP15.18■□□□□ 0.02
LTBR-208ENST00000541005 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 TBC1D5Q92609 795 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 TM6SF1Q9BZW5 370 aa15.18■□□□□ 0.02
LTBR-208ENST00000541005 GNEQ9Y223 722 aaKnown RBP15.18■□□□□ 0.02
LTBR-208ENST00000541005 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
LTBR-208ENST00000541005 RBM47A0AV96 593 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 B4DLN1 442 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 ZBTB43O43298 467 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 EIF5BO60841 1220 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 PGK1P00558 417 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 CPA1P15085 419 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 CASTP20810 708 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 MRPL12P52815 198 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 GJA9P57773 515 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 TNFAIP2Q03169 654 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 SNX17Q15036 470 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 RTN1Q16799 776 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 IQSEC1Q6DN90 963 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 NSUN6Q8TEA1 469 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 DPF3Q92784 378 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 TSEN34Q9BSV6 310 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 ZSWIM6Q9HCJ5 1215 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
LTBR-208ENST00000541005 Q9Y3F1 56 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 CNTNAP5Q8WYK1 1306 aa15.17■□□□□ 0.02
LTBR-208ENST00000541005 DOCK5Q9H7D0 1870 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 KLF18A0A0U1RQI7 1052 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
LTBR-208ENST00000541005 CTAGE5O15320 804 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 EVI5O60447 810 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 CFBP00751 764 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 ADCYAP1R1P41586 468 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 EVCP57679 992 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 PDE4DQ08499 809 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 FUT2Q10981 343 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 CCSAPQ6IQ19 270 aaPredicted RBP15.16■□□□□ 0.02
LTBR-208ENST00000541005 Q6ZUG5 572 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 TAAR1Q96RJ0 339 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 SENP6Q9GZR1 1112 aaPredicted RBP15.16■□□□□ 0.02
LTBR-208ENST00000541005 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
LTBR-208ENST00000541005 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 H0YGN5 161 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 SMPD1P17405 629 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms