RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 TMEM39AQ9NV64 488 aa17.29■□□□□ 0.36
DDX11-217ENST00000540935 ERICH2A1L162 156 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 CTAGE5O15320 804 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 CYP21A2P08686 494 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 RAG1P15918 1043 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 SMPD1P17405 629 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 CDK7P50613 346 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 PTH1RQ03431 593 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 SEC23AQ15436 765 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
DDX11-217ENST00000540935 USH1GQ495M9 461 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
DDX11-217ENST00000540935 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
DDX11-217ENST00000540935 ARVCFO00192 962 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 DYNC1LI2O43237 492 aaPredicted RBP17.27■□□□□ 0.36
DDX11-217ENST00000540935 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.36
DDX11-217ENST00000540935 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
DDX11-217ENST00000540935 PDE4DQ08499 809 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.36
DDX11-217ENST00000540935 DUSP28Q4G0W2 176 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 MCF2L2Q86YR7 1114 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 NCOA7Q8NI08 942 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
DDX11-217ENST00000540935 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
DDX11-217ENST00000540935 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
DDX11-217ENST00000540935 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
DDX11-217ENST00000540935 EDNRBP24530 442 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 BEX3Q00994 111 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 QRICH1Q2TAL8 776 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 CYB5R4Q7L1T6 521 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 MAP4K1Q92918 833 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 JMJD4Q9H9V9 463 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 MRPL11Q9Y3B7 192 aaKnown RBP17.26■□□□□ 0.35
DDX11-217ENST00000540935 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
DDX11-217ENST00000540935 LAMA3Q16787 3333 aa17.26■□□□□ 0.35
DDX11-217ENST00000540935 SZT2Q5T011 3432 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 E7EWF7 191 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 IFIT3O14879 490 aaKnown RBP17.25■□□□□ 0.35
DDX11-217ENST00000540935 FPGSQ05932 587 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 TRAF1Q13077 416 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 SCFD2Q8WU76 684 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 MYH6P13533 1939 aa17.25■□□□□ 0.35
DDX11-217ENST00000540935 TIMP1P01033 207 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 ITGB8P26012 769 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 CPT1AP50416 773 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 SHHQ15465 462 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 BRDTQ58F21 947 aaPredicted RBP17.24■□□□□ 0.35
DDX11-217ENST00000540935 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 DEFB123Q8N688 67 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 SLC43A3Q8NBI5 491 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 VAT1LQ9HCJ6 419 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
DDX11-217ENST00000540935 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 ZBTB5O15062 677 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 ITGA7Q13683 1181 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 WTAPQ15007 396 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 STAG2Q8N3U4 1231 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 IWS1Q96ST2 819 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
DDX11-217ENST00000540935 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
DDX11-217ENST00000540935 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 GRM4Q14833 912 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 C9orf50Q5SZB4 431 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
DDX11-217ENST00000540935 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 MTA3Q9BTC8 594 aa17.22■□□□□ 0.35
DDX11-217ENST00000540935 KPNA6O60684 536 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 CD4P01730 458 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 GHRHRQ02643 423 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 TMEM199Q8N511 208 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
DDX11-217ENST00000540935 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
DDX11-217ENST00000540935 TXNP10599 105 aaKnown RBP17.2■□□□□ 0.34
DDX11-217ENST00000540935 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
DDX11-217ENST00000540935 TROAPQ12815 778 aa17.2■□□□□ 0.34
DDX11-217ENST00000540935 PPIGQ13427 754 aaKnown RBP eCLIP17.2■□□□□ 0.349e-7■■■□□ 15.8
DDX11-217ENST00000540935 STXBP2Q15833 593 aa17.2■□□□□ 0.34
DDX11-217ENST00000540935 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
DDX11-217ENST00000540935 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
DDX11-217ENST00000540935 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
DDX11-217ENST00000540935 MB21D2Q8IYB1 491 aaPredicted RBP17.2■□□□□ 0.34
DDX11-217ENST00000540935 TBC1D5Q92609 795 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms