RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 NT5DC1Q5TFE4 455 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 DCAF15Q66K64 600 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 CEP57L1Q8IYX8 460 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 KLRG1Q96E93 195 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 FEM1BQ9UK73 627 aa13.9□□□□□ -0.18
AP003559.1-201ENST00000540906 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 LAD1O00515 517 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 PLA2G6O60733 806 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 VCAM1P19320 739 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 TXKP42681 527 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 DPYDQ12882 1025 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 CALCRLQ16602 461 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 DDX25Q9UHL0 483 aaKnown RBP13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 RLFQ13129 1914 aa13.89□□□□□ -0.19
AP003559.1-201ENST00000540906 CUL4BQ13620 913 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 MORC3Q14149 939 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 PPP4R3AQ6IN85 833 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 FAM160B2Q86V87 743 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 IGSF22Q8N9C0 903 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 MED15Q96RN5 788 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 CCSER1Q9C0I3 900 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 HSD3B7Q9H2F3 369 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 WDR90Q96KV7 1748 aa13.88□□□□□ -0.19
AP003559.1-201ENST00000540906 POTEMA6NI47 508 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 WDR46O15213 610 aaKnown RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 USP2O75604 605 aaPredicted RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 MBOAT7Q96N66 472 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 PLCG1P19174 1290 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 ARHGAP4P98171 946 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 CABP7Q86V35 215 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 FCHSD1Q86WN1 690 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 IQUBQ8NA54 791 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 LENG9Q96B70 501 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 SLF1Q9BQI6 1058 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 BPIFA3Q9BQP9 254 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 GINM1Q9NU53 330 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 PPP2R3BQ9Y5P8 575 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
AP003559.1-201ENST00000540906 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 FAM86B1E9PN63 330 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 CAVIN2O95810 425 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 CFBP00751 764 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 FAM86B2P0C5J1 330 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 STAT6P42226 847 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 UBXN2AP68543 259 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 GRB10Q13322 594 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 ECM1Q16610 540 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
AP003559.1-201ENST00000540906 CYP3A7-CYP3A51PA0A087WV96 503 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 CYP3A7P24462 503 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 SREBF1P36956 1147 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 UBA7P41226 1012 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 ZNF75DP51815 510 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 HMGCS2P54868 508 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 BACE1P56817 501 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 RRAGBQ5VZM2 374 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 KANK3Q6NY19 840 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 PLA2G4DQ86XP0 818 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 CLEC4DQ8WXI8 215 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 LPAR1Q92633 364 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 RAVER2Q9HCJ3 691 aaKnown RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 KCNMB3Q9NPA1 279 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 PICK1Q9NRD5 415 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms