RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 Q6ZUG5 572 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 UBE2Q1Q7Z7E8 422 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 MCF2L2Q86YR7 1114 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 SRBD1Q8N5C6 995 aaKnown RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 DIS3LQ8TF46 1054 aaKnown RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 RRP36Q96EU6 259 aaKnown RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 SPZ1Q9BXG8 430 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ABHD16BQ9H3Z7 469 aa10.7□□□□□ -0.7
SNHG1-215ENST00000540904 ADD3Q9UEY8 706 aaKnown RBP10.7□□□□□ -0.7
SNHG1-215ENST00000540904 GOLGA8BA8MQT2 603 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 CFBP00751 764 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RARBP10826 455 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 AKR1A1P14550 325 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 TRAF1Q13077 416 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RTN1Q16799 776 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RUFY3Q7L099 469 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 EEPD1Q7L9B9 569 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 NECAB2Q7Z6G3 386 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 BRF1Q92994 677 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
SNHG1-215ENST00000540904 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
SNHG1-215ENST00000540904 ZSWIM6Q9HCJ5 1215 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RBM28Q9NW13 759 aaKnown RBP10.69□□□□□ -0.7
SNHG1-215ENST00000540904 SEC63Q9UGP8 760 aaKnown RBP10.69□□□□□ -0.7
SNHG1-215ENST00000540904 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
SNHG1-215ENST00000540904 RBBP6Q7Z6E9 1792 aaKnown RBP10.69□□□□□ -0.7
SNHG1-215ENST00000540904 hCG_1642624A0A1W2PR95 340 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 GOLGA8AA7E2F4 631 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 OPLAHO14841 1288 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 EIF5BO60841 1220 aaKnown RBP10.68□□□□□ -0.7
SNHG1-215ENST00000540904 SEC24BO95487 1268 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-215ENST00000540904 ALDH5A1P51649 535 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-215ENST00000540904 CCDC144BQ3MJ40 725 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 FBXO16Q8IX29 292 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-215ENST00000540904 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-215ENST00000540904 C11orf49Q9H6J7 331 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 COL20A1Q9P218 1284 aa10.68□□□□□ -0.7
SNHG1-215ENST00000540904 DNM1LO00429 736 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 PGK1P00558 417 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 CDC27P30260 824 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 HOXA13P31271 388 aaPredicted RBP10.67□□□□□ -0.7
SNHG1-215ENST00000540904 METAP2P50579 478 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNHG1-215ENST00000540904 PDE4DQ08499 809 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 GJC2Q5T442 439 aaPredicted RBP10.67□□□□□ -0.7
SNHG1-215ENST00000540904 NOL8Q76FK4 1167 aaKnown RBP10.67□□□□□ -0.7
SNHG1-215ENST00000540904 FBXL16Q8N461 479 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 ARRDC4Q8NCT1 418 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 DNERQ8NFT8 737 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 DPF3Q92784 378 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 TAAR1Q96RJ0 339 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
SNHG1-215ENST00000540904 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 AGXT2Q9BYV1 514 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 MAF1Q9H063 256 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 KATNBL1Q9H079 304 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 PDRG1Q9NUG6 133 aa10.67□□□□□ -0.7
SNHG1-215ENST00000540904 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 CCDC196A0A1B0GTZ2 297 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 B4DLN1 442 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 KBTBD13C9JR72 458 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 ADCY6O43306 1168 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 POLR2MP0CAP2 368 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 EIF2AK2P19525 551 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 HSD17B4P51659 736 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 MRPL12P52815 198 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 RCAN1P53805 252 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 TNFAIP2Q03169 654 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 TOB2Q14106 344 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 LRRC41Q15345 812 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 ARHGEF16Q5VV41 709 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 RNF180Q86T96 592 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 MORC4Q8TE76 937 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 SENP6Q9GZR1 1112 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 VTA1Q9NP79 307 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 PDGFCQ9NRA1 345 aa10.66□□□□□ -0.7
SNHG1-215ENST00000540904 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-215ENST00000540904 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms