RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SYT1P21579 422 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 GUCY1A2P33402 732 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 ECE1P42892 770 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 NOVP48745 357 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 KLRC3Q07444 240 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 TRIM29Q14134 588 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 MAP3K11Q16584 847 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 ASPRV1Q53RT3 343 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 GPATCH4Q5T3I0 446 aaKnown RBP7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 TMTC3Q6ZXV5 915 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 SAPCD2Q86UD0 394 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 SIAH1Q8IUQ4 282 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 PARP9Q8IXQ6 854 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 SCYL3Q8IZE3 742 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 SPICE1Q8N0Z3 855 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 STAG2Q8N3U4 1231 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 ACER1Q8TDN7 264 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 DCAF4Q8WV16 495 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 KLRG1Q96E93 195 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 VAT1LQ9HCJ6 419 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 MAD2L2Q9UI95 211 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 A0A1W2PRG0 241 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 PRPF3O43395 683 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 DEXIO95424 95 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 NDUFB10O96000 172 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 BMP3P12645 472 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 FDPSP14324 419 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 PTPRAP18433 802 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 DDIT3P35638 169 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 HTRA3P83110 453 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 GUCY1B3Q02153 619 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 ZNF543Q08ER8 600 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 SPP2Q13103 211 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 NTRK3Q16288 839 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 LDLRAD1Q5T700 205 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 MCTP1Q6DN14 999 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 CCDC84Q86UT8 332 aaPredicted RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 SRBD1Q8N5C6 995 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 RRP36Q96EU6 259 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 CLMNQ96JQ2 1002 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 C8orf76Q96K31 380 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 RNF26Q9BY78 433 aaPredicted RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 UBA5Q9GZZ9 404 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 SEC63Q9UGP8 760 aaKnown RBP7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 SYNPO2Q9UMS6 1093 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 TMX2Q9Y320 296 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 ZHX2Q9Y6X8 837 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 NID2Q14112 1375 aa7.67□□□□□ -1.18
CLTCL1-206ENST00000540896 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 hCG_1642624A0A1W2PR95 340 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 UNCXA6NJT0 531 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 TRIM75PA6NK02 468 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 USP17L10C9JJH3 530 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 TMEM232C9JQI7 657 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 ZSCAN22P10073 491 aaPredicted RBP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 SMARCA1P28370 1054 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 ZNF157P51786 506 aaPredicted RBP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 USP14P54578 494 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 PKP1Q13835 747 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 VGLL4Q14135 290 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 SAFBQ15424 915 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 TUSC1Q2TAM9 212 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 DEFB115Q30KQ5 88 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 NOL9Q5SY16 702 aaKnown RBP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 RGMBQ6NW40 437 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 RASGRP2Q7LDG7 609 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 HOMER1Q86YM7 354 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 ZNF280CQ8ND82 737 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 GMCL1P1Q8NEA9 526 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 NUP88Q99567 741 aaPredicted RBP7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 CPVLQ9H3G5 476 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 VCPKMTQ9H867 229 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 ELP3Q9H9T3 547 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 STK36Q9NRP7 1315 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 SIPA1L1O43166 1804 aa7.66□□□□□ -1.18
CLTCL1-206ENST00000540896 RASSF10A6NK89 507 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 C19orf81C9J6K1 198 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 SNHG28P0DPA3 235 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 SLC16A2P36021 539 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 BACE1P56817 501 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 GRM1Q13255 1194 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 FOXD4L6Q3SYB3 417 aaPredicted RBP7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 FAM83BQ5T0W9 1011 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 OTUD7BQ6GQQ9 843 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 TTBK2Q6IQ55 1244 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms