RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 MTA3Q9BTC8 594 aa15.71■□□□□ 0.11
COLCA1-204ENST00000540738 HNRNPDLO14979 420 aaKnown RBP15.71■□□□□ 0.1
COLCA1-204ENST00000540738 RASA3Q14644 834 aa15.71■□□□□ 0.1
COLCA1-204ENST00000540738 PARP2Q9UGN5 583 aa15.71■□□□□ 0.1
COLCA1-204ENST00000540738 CTAGE15A4D2H0 777 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 C19orf81C9J6K1 198 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CTAGE8P0CG41 777 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CTAGE6Q86UF2 777 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CTAGE4Q8IX94 777 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 TBCKQ8TEA7 893 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 MMP19Q99542 508 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 DCP1AQ9NPI6 582 aaPredicted RBP15.7■□□□□ 0.1
COLCA1-204ENST00000540738 RNF146Q9NTX7 359 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 KIAA1024Q9UPX6 916 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 FAM169AQ9Y6X4 670 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 PHLPP2Q6ZVD8 1323 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 TTLL4Q14679 1199 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 IGSF22Q8N9C0 903 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 RDH13Q8NBN7 331 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
COLCA1-204ENST00000540738 SERTAD1Q9UHV2 236 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CTAGE9A4FU28 777 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 ASB14A6NK59 587 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 GMPSP49915 693 aaPredicted RBP15.7■□□□□ 0.1
COLCA1-204ENST00000540738 JAK3P52333 1124 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CCDC186Q7Z3E2 898 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 SESTD1Q86VW0 696 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 POMGNT1Q8WZA1 660 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 FAM204AQ9H8W3 233 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 WDR70Q9NW82 654 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 ANKFY1Q9P2R3 1169 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CACTINQ8WUQ7 758 aaKnown RBP15.7■□□□□ 0.1
COLCA1-204ENST00000540738 CCDC114Q96M63 670 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 ACAD9Q9H845 621 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 RFX7Q2KHR2 1363 aa15.7■□□□□ 0.1
COLCA1-204ENST00000540738 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
COLCA1-204ENST00000540738 NTSR2O95665 410 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 BIRC2Q13490 618 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 NEDD9Q14511 834 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 APOL6Q9BWW8 343 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 ZBTB5O15062 677 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 FOXO4P98177 505 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 TCP11Q8WWU5 503 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 RMDN3Q96TC7 470 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 ELP3Q9H9T3 547 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 BCCIPQ9P287 314 aaKnown RBP eCLIP15.69■□□□□ 0.1
COLCA1-204ENST00000540738 ARL1P40616 181 aaPredicted RBP15.69■□□□□ 0.1
COLCA1-204ENST00000540738 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 HUNKP57058 714 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 SND1Q7KZF4 910 aaKnown RBP eCLIP15.69■□□□□ 0.1
COLCA1-204ENST00000540738 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
COLCA1-204ENST00000540738 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
COLCA1-204ENST00000540738 ANGEL2Q5VTE6 544 aaKnown RBP15.68■□□□□ 0.1
COLCA1-204ENST00000540738 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 SNAP23O00161 211 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 STAT3P40763 770 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 MTIF3Q9H2K0 278 aaKnown RBP15.68■□□□□ 0.1
COLCA1-204ENST00000540738 CAPN9O14815 690 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 CEP128Q6ZU80 1094 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 MAATS1Q7Z4T9 603 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 RAVER2Q9HCJ3 691 aaKnown RBP15.68■□□□□ 0.1
COLCA1-204ENST00000540738 LRRC7Q96NW7 1537 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 HOXA7P31268 230 aaPredicted RBP15.68■□□□□ 0.1
COLCA1-204ENST00000540738 TUBB4BP68371 445 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 SCRN1Q12765 414 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 GUCA1BQ9UMX6 200 aa15.68■□□□□ 0.1
COLCA1-204ENST00000540738 E7EVH7 732 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 TNNC1P63316 161 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 SCARF1Q14162 830 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
COLCA1-204ENST00000540738 STAMQ92783 540 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 FTOQ9C0B1 505 aaKnown RBP eCLIP15.67■□□□□ 0.1
COLCA1-204ENST00000540738 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 PTPREP23469 700 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 CMA1P23946 247 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
COLCA1-204ENST00000540738 LPAR1Q92633 364 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 ST7Q9NRC1 585 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 STK17AQ9UEE5 414 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 NFE2L3Q9Y4A8 694 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 PAXBP1Q9Y5B6 917 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 RGS12O14924 1447 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 CALCOCO2Q13137 446 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 ALX1Q15699 326 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 CTTNBP2NLQ9P2B4 639 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 PSMD14O00487 310 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 MTERF2Q49AM1 385 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 CFAP58Q5T655 872 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 TMEM47Q9BQJ4 181 aa15.67■□□□□ 0.1
COLCA1-204ENST00000540738 TMEM206Q9H813 350 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms