RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
CACFD1-206ENST00000540581 LRRC1Q9BTT6 524 aa17.75■□□□□ 0.43
CACFD1-206ENST00000540581 TRIM9Q9C026 710 aa17.75■□□□□ 0.43
CACFD1-206ENST00000540581 KBTBD4Q9NVX7 518 aa17.75■□□□□ 0.43
CACFD1-206ENST00000540581 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
CACFD1-206ENST00000540581 AKR1B10O60218 316 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
CACFD1-206ENST00000540581 DMGDHQ9UI17 866 aaKnown RBP17.74■□□□□ 0.43
CACFD1-206ENST00000540581 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 A0A1W2PQC6 194 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
CACFD1-206ENST00000540581 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
CACFD1-206ENST00000540581 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 GLIS3Q8NEA6 775 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 ATP8A2Q9NTI2 1148 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 LRP5O75197 1615 aa17.74■□□□□ 0.43
CACFD1-206ENST00000540581 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 STXBP3O00186 592 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 PTPROQ16827 1216 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 MAP9Q49MG5 647 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 PAPD7Q5XG87 772 aaKnown RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 NLRC4Q9NPP4 1024 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 CCNE1P24864 410 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 EIF4A3P38919 411 aaKnown RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 ZBED6P86452 979 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 ARID5AQ03989 594 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 MIIPQ5JXC2 388 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 CCDC47Q96A33 483 aaKnown RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 ANKIB1Q9P2G1 1089 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 SSBP05455 408 aaKnown RBP eCLIP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 IVLP07476 585 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 OR52Z1P0C646 297 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 APBA1Q02410 837 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 CKAP4Q07065 602 aaKnown RBP17.73■□□□□ 0.43
CACFD1-206ENST00000540581 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 SEMA6BQ9H3T3 888 aa17.73■□□□□ 0.43
CACFD1-206ENST00000540581 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 MS4A14Q96JA4 679 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 MED4Q9NPJ6 270 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 ARHGAP20Q9P2F6 1191 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 CACNA1SQ13698 1873 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 FRMPD2Q68DX3 1309 aaPredicted RBP17.72■□□□□ 0.43
CACFD1-206ENST00000540581 KCNB1Q14721 858 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 TDRD12Q587J7 1177 aaKnown RBP17.72■□□□□ 0.43
CACFD1-206ENST00000540581 CCNI2Q6ZMN8 369 aaPredicted RBP17.72■□□□□ 0.43
CACFD1-206ENST00000540581 TBCKQ8TEA7 893 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 TTYH3Q9C0H2 523 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
CACFD1-206ENST00000540581 GOLGA6BA6NDN3 693 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 TUBB4BP68371 445 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 GFPT1Q06210 699 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-206ENST00000540581 C12orf60Q5U649 245 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-206ENST00000540581 DHTKD1Q96HY7 919 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-206ENST00000540581 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 POTEMA6NI47 508 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 EIF3CLB5ME19 914 aaKnown RBP17.71■□□□□ 0.43
CACFD1-206ENST00000540581 KIF11P52732 1056 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 VAV2P52735 878 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 RASSF7Q02833 373 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 GRM4Q14833 912 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 MEA1Q16626 185 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 EHBP1Q8NDI1 1231 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 PIGSQ96S52 555 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 EIF3CQ99613 913 aaKnown RBP17.71■□□□□ 0.43
CACFD1-206ENST00000540581 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
CACFD1-206ENST00000540581 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 ESYT3A0FGR9 886 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 LRRC53A6NM62 1247 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 AGPSO00116 658 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
CACFD1-206ENST00000540581 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 SALL4Q9UJQ4 1053 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 FLT1P17948 1338 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 BICDL2A1A5D9 508 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 GOLGA6CA6NDK9 693 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 PRPF6O94906 941 aaKnown RBP17.7■□□□□ 0.42
CACFD1-206ENST00000540581 GOLGA6DP0CG33 693 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
CACFD1-206ENST00000540581 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
CACFD1-206ENST00000540581 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 KCTD16Q68DU8 428 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 COA7Q96BR5 231 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 GOLGA6AQ9NYA3 693 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 DISP2A7MBM2 1401 aa17.7■□□□□ 0.42
CACFD1-206ENST00000540581 M0R2N6 131 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 TACC1O75410 805 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms