RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.11
INO80E-203ENST00000540562 TTI2Q6NXR4 508 aa15.77■□□□□ 0.11
INO80E-203ENST00000540562 FAM196AQ6ZSG2 479 aa15.77■□□□□ 0.11
INO80E-203ENST00000540562 KCTD1Q719H9 257 aa15.77■□□□□ 0.11
INO80E-203ENST00000540562 KCNK18Q7Z418 384 aa15.77■□□□□ 0.11
INO80E-203ENST00000540562 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.11
INO80E-203ENST00000540562 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.11
INO80E-203ENST00000540562 NPHP3-ACAD11A0A0J9YXS1 232 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 TRIM66O15016 1216 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 GTF2IP78347 998 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 GPSM2P81274 684 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 GRM4Q14833 912 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 RRAGAQ7L523 313 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 KIAA0895Q8NCT3 520 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 ZSCAN26Q16670 478 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 C10orf67Q8IYJ2 551 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 CNBD1Q8NA66 436 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 SMARCC1Q92922 1105 aaPredicted RBP15.76■□□□□ 0.11
INO80E-203ENST00000540562 P2RX5Q93086 422 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 CCDC42Q96M95 316 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 SAR1BQ9Y6B6 198 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 CAPN6Q9Y6Q1 641 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 TRMT1LQ7Z2T5 733 aaKnown RBP15.76■□□□□ 0.11
INO80E-203ENST00000540562 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
INO80E-203ENST00000540562 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
INO80E-203ENST00000540562 PACSIN2Q9UNF0 486 aaPredicted RBP15.76■□□□□ 0.11
INO80E-203ENST00000540562 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 AKR1B10O60218 316 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 FGRP09769 529 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 TM4SF1P30408 202 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 TRAPPC10P48553 1259 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 TCP10Q12799 353 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 DPP8Q6V1X1 898 aaPredicted RBP15.75■□□□□ 0.11
INO80E-203ENST00000540562 HDXQ7Z353 690 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 REXO1Q8N1G1 1221 aaKnown RBP15.75■□□□□ 0.11
INO80E-203ENST00000540562 CCDC148Q8NFR7 591 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
INO80E-203ENST00000540562 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 NARFQ9UHQ1 456 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 MYMKA6NI61 221 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 ERLIN1O75477 346 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 SNX29Q8TEQ0 813 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 COG1Q8WTW3 980 aa15.75■□□□□ 0.11
INO80E-203ENST00000540562 ZNF263O14978 683 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
INO80E-203ENST00000540562 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
INO80E-203ENST00000540562 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 DOCK2Q92608 1830 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 IRX5P78411 483 aaPredicted RBP15.74■□□□□ 0.11
INO80E-203ENST00000540562 GFPT1Q06210 699 aaPredicted RBP15.74■□□□□ 0.11
INO80E-203ENST00000540562 CALCRLQ16602 461 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 GOLPH3Q9H4A6 298 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 BCORQ6W2J9 1755 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 SPATA31A5Q5VU36 1347 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 SPATA31A7Q8IWB4 1347 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 MMTAG2Q9BU76 263 aaKnown RBP15.74■□□□□ 0.11
INO80E-203ENST00000540562 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 KBTBD4Q9NVX7 518 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 PCDHAC2Q9Y5I4 1007 aa15.74■□□□□ 0.11
INO80E-203ENST00000540562 MYH10P35580 1976 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 ESYT3A0FGR9 886 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 AKR1B1P15121 316 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 GPS2Q13227 327 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 BRD3Q15059 726 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
INO80E-203ENST00000540562 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 L1RE1Q9UN81 338 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 LRP5O75197 1615 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 FLT1P17948 1338 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L15C9J2P7 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L13C9JLJ4 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L11C9JVI0 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L18D6R9N7 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L22D6RA61 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L17D6RBQ6 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L19D6RCP7 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L20D6RJB6 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 EIF4A3P38919 411 aaKnown RBP15.73■□□□□ 0.11
INO80E-203ENST00000540562 RASSF7Q02833 373 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L24Q0WX57 530 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 SPA17Q15506 151 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 USP17L6PQ6QN14 398 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 CACNA2D4Q7Z3S7 1137 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
INO80E-203ENST00000540562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
INO80E-203ENST00000540562 IFIH1Q9BYX4 1025 aaKnown RBP15.73■□□□□ 0.11
INO80E-203ENST00000540562 ITIH6Q6UXX5 1313 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms