RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 C9orf50Q5SZB4 431 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 TMEM63BQ5T3F8 832 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 TLK2Q86UE8 772 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 DEFB123Q8N688 67 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 EYSQ5T1H1 3165 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 TNKSO95271 1327 aa15.35■□□□□ 0.05
SEMA4D-223ENST00000540475 RAG1P15918 1043 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 FBXO16Q8IX29 292 aaPredicted RBP15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 RUFY2Q8WXA3 655 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 UNC80Q8N2C7 3258 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 GRIN2DO15399 1336 aa15.34■□□□□ 0.05
SEMA4D-223ENST00000540475 PTPDC1A2A3K4 754 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 SGSM2O43147 1006 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 DYNC1LI2O43237 492 aaPredicted RBP15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 CYP21A2P08686 494 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 EPHB4P54760 987 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 BEX3Q00994 111 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 GHRHRQ02643 423 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 PTH1RQ03431 593 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 MFSD5Q6N075 450 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 JMJD4Q9H9V9 463 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 ABCB11O95342 1321 aa15.33■□□□□ 0.04
SEMA4D-223ENST00000540475 PALM3A6NDB9 673 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 ZEB2O60315 1214 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 PARP1P09874 1014 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 CALML3P27482 149 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 IFIT1BQ5T764 474 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 CXCL17Q6UXB2 119 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 Q7L0L9 218 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 MAP4K1Q92918 833 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 UBAC1Q9BSL1 405 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 WDR11Q9BZH6 1224 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 STXBP5LQ9Y2K9 1186 aa15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-223ENST00000540475 NKRFO15226 690 aaKnown RBP eCLIP15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 PTGS1P23219 599 aa15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 FPGSQ05932 587 aa15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 QRICH1Q2TAL8 776 aa15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 MPHOSPH6Q99547 160 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 MAD2L2Q9UI95 211 aa15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 BAZ2BQ9UIF8 2168 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-223ENST00000540475 A6NJR5 290 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 MYH7BA7E2Y1 1941 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 B4DLN1 442 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 TLR3O15455 904 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 USH1GQ495M9 461 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 RASIP1Q5U651 963 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 C16orf59Q7L2K0 433 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 MCF2L2Q86YR7 1114 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 STAG2Q8N3U4 1231 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 TBC1D5Q92609 795 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 IWS1Q96ST2 819 aa15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-223ENST00000540475 E7EWF7 191 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 OPLAHO14841 1288 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 CPT1AP50416 773 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 PURAQ00577 322 aaKnown RBP15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 PDE4DQ08499 809 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 TROAPQ12815 778 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 TRDNQ13061 729 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 CCDC62Q6P9F0 684 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 FBXO11Q86XK2 927 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 SAMD3Q8N6K7 520 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 GUCD1Q96NT3 240 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 POLR3EQ9NVU0 708 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 COL20A1Q9P218 1284 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 MRPL11Q9Y3B7 192 aaKnown RBP15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 TAF6LQ9Y6J9 622 aa15.29■□□□□ 0.04
SEMA4D-223ENST00000540475 PRUNE2Q8WUY3 3088 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 CHD9Q3L8U1 2897 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 KPNA6O60684 536 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 HSD17B4P51659 736 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 GRM4Q14833 912 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms