RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 RMND1Q9NWS8 449 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TNIP1Q15025 636 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 LRRC8CQ8TDW0 803 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 DNAJC9Q8WXX5 260 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 FERP16591 822 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 RNASELQ05823 741 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 PDE4DQ08499 809 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 GSTA5Q7RTV2 222 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 DZIP3Q86Y13 1208 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 PRPF31Q8WWY3 499 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 CLMNQ96JQ2 1002 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 SKIP12755 728 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 CCND1P24385 295 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TIMM10P62072 90 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TRPM8Q7Z2W7 1104 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 PRM3Q9NNZ6 103 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TCHHQ07283 1943 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 RTN1Q16799 776 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 MAIP1Q8WWC4 291 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
PBX1-212ENST00000540236 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 CNNM1Q9NRU3 951 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 FANCGO15287 622 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 ABCB4P21439 1286 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 MPP4Q96JB8 637 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 M0R2C6 588 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 SASH1O94885 1247 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 PPP1R2P41236 205 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 DRP2Q13474 957 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 PPP1R2P3Q6NXS1 205 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 TTC1Q99614 292 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 PCDHB6Q9Y5E3 794 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 ACSL3O95573 720 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 FGFR4P22455 802 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 SLC39A14Q15043 492 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
PBX1-212ENST00000540236 ARHGEF10LQ9HCE6 1279 aa12.11□□□□□ -0.47
PBX1-212ENST00000540236 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 AOX1Q06278 1338 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 ATP9AO75110 1047 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 TAF5LO75529 589 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 UBOX5O94941 541 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 KRT2P35908 639 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 SPAG7O75391 227 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 FYB2Q5VWT5 728 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 MTRF1LQ9UGC7 380 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 E9PCH4 1651 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 TARSL2A2RTX5 802 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 DNM1LO00429 736 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 COPB2P35606 906 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 MLH1P40692 756 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 UBA7P41226 1012 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 CCDC62Q6P9F0 684 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
PBX1-212ENST00000540236 VAT1LQ9HCJ6 419 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 TTC26A0AVF1 554 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 GYPCP04921 128 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
PBX1-212ENST00000540236 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
PBX1-212ENST00000540236 GOLPH3Q9H4A6 298 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms