RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 USP17L21D6R901 530 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 M0R2C6 588 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 TRAF5O00463 557 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZNF213O14771 459 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 SLU7O95391 586 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ASNSP08243 561 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 HSPD1P10809 573 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 KCNJ6P48051 423 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 HUNKP57058 714 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZRSR1Q15695 479 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZSCAN26Q16670 478 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 DEFB115Q30KQ5 88 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 C12orf60Q5U649 245 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 MMS22LQ6ZRQ5 1243 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 FILIP1Q7Z7B0 1213 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZNF444Q8N0Y2 327 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 FAM227BQ96M60 508 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 SRRTQ9BXP5 876 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 TTC12Q9H892 705 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 MKNK2Q9HBH9 465 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 DDX4Q9NQI0 724 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZNF446Q9NWS9 450 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 ZNF112Q9UJU3 913 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 PALD1Q9ULE6 856 aa8.57□□□□□ -1.04
NECAP1-204ENST00000540083 RRP15Q9Y3B9 282 aaKnown RBP8.57□□□□□ -1.04
NECAP1-204ENST00000540083 PAPPA2Q9BXP8 1791 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 A0A0D9SFI3 127 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 DDTLA6NHG4 134 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 USP2O75604 605 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 TNNT1P13805 278 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 INHBEP58166 350 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 PPP1R26Q5T8A7 1209 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 CST9Q5W186 159 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 SYT10Q6XYQ8 523 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 SAPCD2Q86UD0 394 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 EFCAB13Q8IY85 973 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 WRNIP1Q96S55 665 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 KCNF1Q9H3M0 494 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 L2HGDHQ9H9P8 463 aa8.56□□□□□ -1.04
NECAP1-204ENST00000540083 SAP30BPQ9UHR5 308 aaKnown RBP8.56□□□□□ -1.04
NECAP1-204ENST00000540083 KLHL33A6NCF5 533 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 RASSF10A6NK89 507 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 TMCO5BA8MYB1 307 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PRKAB2O43741 272 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ZRANB2O95218 330 aaKnown RBP eCLIP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 FGAP02671 866 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ZBTB48P10074 688 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ZKSCAN1P17029 563 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ZNF157P51786 506 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PPATQ06203 517 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PPARAQ07869 468 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 NOGQ13253 232 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 CUL4AQ13619 759 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 NOL9Q5SY16 702 aaKnown RBP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 LDLRAD1Q5T700 205 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PRAMEF18Q5VWM3 479 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 OTUD7BQ6GQQ9 843 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 RGMBQ6NW40 437 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 FBXO38Q6PIJ6 1188 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 MFSD6Q6ZSS7 791 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 MIGA2Q7L4E1 593 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 SCYL3Q8IZE3 742 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ANKRD20A12PQ8NF67 263 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.55□□□□□ -1.04
NECAP1-204ENST00000540083 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 SH2D4AQ9H788 454 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 ANAPC4Q9UJX5 808 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 PYCARDQ9ULZ3 195 aa8.55□□□□□ -1.04
NECAP1-204ENST00000540083 FOCADQ5VW36 1801 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 UBE2Q2LH0YL09 131 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 GPR37L1O60883 481 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 PNMA6AP0CW24 399 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-204ENST00000540083 MAP2K2P36507 400 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 CAP2P40123 477 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 PRKG1Q13976 671 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 KRT32Q14532 448 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
NECAP1-204ENST00000540083 CEP135Q66GS9 1140 aa8.54□□□□□ -1.04
NECAP1-204ENST00000540083 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms