RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 IKZF1Q13422 519 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 SQSTM1Q13501 440 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 HLTFQ14527 1009 aaKnown RBP eCLIP7.66□□□□□ -1.18
MRE11-209ENST00000540013 NBPF9Q3BBW0 867 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 TP53INP2Q8IXH6 220 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 MPHOSPH6Q99547 160 aaKnown RBP7.66□□□□□ -1.18
MRE11-209ENST00000540013 SEMA3GQ9NS98 782 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 ACTR10Q9NZ32 417 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 LMCD1Q9NZU5 365 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 RPS6KL1Q9Y6S9 549 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 CLIP1P30622 1438 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
MRE11-209ENST00000540013 CASKIN1Q8WXD9 1431 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 DENND4BO75064 1496 aaPredicted RBP7.66□□□□□ -1.18
MRE11-209ENST00000540013 CCDC18Q5T9S5 1454 aa7.66□□□□□ -1.18
MRE11-209ENST00000540013 FAM86C2PA6NEL3 165 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 PLCH2O75038 1416 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 SRFP11831 508 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 SLC7A5Q01650 507 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 NMIQ13287 307 aaPredicted RBP7.65□□□□□ -1.18
MRE11-209ENST00000540013 ZRSR2Q15696 482 aaKnown RBP7.65□□□□□ -1.18
MRE11-209ENST00000540013 TKFCQ3LXA3 575 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 ARHGEF40Q8TER5 1519 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 UBE2FQ969M7 185 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 ARNT2Q9HBZ2 717 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 ZSWIM5Q9P217 1185 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 SFMBT1Q9UHJ3 866 aa7.65□□□□□ -1.18
MRE11-209ENST00000540013 FYCO1Q9BQS8 1478 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 ALG1L2C9J202 215 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 KCNQ2O43526 872 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 MYL1P05976 194 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 NAT2P11245 290 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 AUHQ13825 339 aaKnown RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 NCAPHQ15003 741 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 ZYXQ15942 572 aaKnown RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 GNPTABQ3T906 1256 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 TSPYL5Q86VY4 417 aaPredicted RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 JAMLQ86YT9 394 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 C7orf61Q8IZ16 206 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 SYNPOQ8N3V7 929 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 SYTL5Q8TDW5 730 aaPredicted RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 CCDC120Q96HB5 630 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 NAP1L4Q99733 375 aaKnown RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 MTA3Q9BTC8 594 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 ZNF700Q9H0M5 742 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 DUSP15Q9H1R2 295 aaPredicted RBP7.64□□□□□ -1.19
MRE11-209ENST00000540013 FBXL21Q9UKT6 434 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 PLAAQ9Y263 795 aa7.64□□□□□ -1.19
MRE11-209ENST00000540013 ZMYM4Q5VZL5 1548 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 SMAD7O15105 426 aaKnown RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 LRRN2O75325 713 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 ALDH1L1O75891 902 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 CD8BP10966 210 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 TPP2P29144 1249 aaPredicted RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 PMLP29590 882 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 GP2P55259 537 aaKnown RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 POU5F1BQ06416 359 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 BNIP3Q12983 259 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 RASGRF1Q13972 1273 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 BRD3Q15059 726 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 PPP2R5AQ15172 486 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 TCEA2Q15560 299 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 C2orf27AQ580R0 203 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 AMOTL1Q8IY63 956 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 ZNF655Q8N720 491 aaPredicted RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 DAGLBQ8NCG7 672 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 SYTL4Q96C24 671 aaPredicted RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 ZNF512BQ96KM6 892 aaPredicted RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
MRE11-209ENST00000540013 SWAP70Q9UH65 585 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 BCORL1Q5H9F3 1711 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 CDC42BPBQ9Y5S2 1711 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 ADAMTSL3P82987 1691 aa7.63□□□□□ -1.19
MRE11-209ENST00000540013 LTBP3Q9NS15 1303 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 PDPK1O15530 556 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 SIGLEC6O43699 453 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 ENDOUP21128 410 aaKnown RBP7.62□□□□□ -1.19
MRE11-209ENST00000540013 FUT4P22083 530 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 BDNFP23560 247 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 CNGA1P29973 690 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 PLCL1Q15111 1095 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 TTF1Q15361 905 aaPredicted RBP7.62□□□□□ -1.19
MRE11-209ENST00000540013 FXNQ16595 210 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 DALRD3Q5D0E6 543 aaKnown RBP7.62□□□□□ -1.19
MRE11-209ENST00000540013 PCGF5Q86SE9 256 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 ATP13A1Q9HD20 1204 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 DUSP13Q9UII6 198 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 FBXO9Q9UK97 447 aaPredicted RBP7.62□□□□□ -1.19
MRE11-209ENST00000540013 ARHGAP5Q13017 1502 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 ZFYVE16Q7Z3T8 1539 aa7.62□□□□□ -1.19
MRE11-209ENST00000540013 POGZQ7Z3K3 1410 aa7.61□□□□□ -1.19
MRE11-209ENST00000540013 SCAPERQ9BY12 1400 aa7.61□□□□□ -1.19
MRE11-209ENST00000540013 PREX2Q70Z35 1606 aa7.61□□□□□ -1.19
MRE11-209ENST00000540013 EXOC5O00471 708 aa7.61□□□□□ -1.19
MRE11-209ENST00000540013 POU3F3P20264 500 aaPredicted RBP7.61□□□□□ -1.19
MRE11-209ENST00000540013 LTKP29376 864 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms