RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 TRANK1O15050 2925 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 SLC16A2P36021 539 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 STAT2P52630 851 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 MRPS5P82675 430 aaKnown RBP17.67■□□□□ 0.42
USB1-203ENST00000539737 PPARAQ07869 468 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
USB1-203ENST00000539737 AP5M1Q9H0R1 490 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
USB1-203ENST00000539737 PLIN4Q96Q06 1357 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 SLC1A4P43007 532 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 OAZ1P54368 228 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 NKX3-2P78367 333 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
USB1-203ENST00000539737 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
USB1-203ENST00000539737 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 COPS5Q92905 334 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 CYP39A1Q9NYL5 469 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
USB1-203ENST00000539737 PATL2C9JE40 543 aaKnown RBP17.65■□□□□ 0.42
USB1-203ENST00000539737 NFIBO00712 420 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 CA3P07451 260 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 MYL3P08590 195 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
USB1-203ENST00000539737 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 NACAP1Q9BZK3 213 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
USB1-203ENST00000539737 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 SLC4A7Q9Y6M7 1214 aa17.65■□□□□ 0.42
USB1-203ENST00000539737 FRMPD2Q68DX3 1309 aaPredicted RBP17.65■□□□□ 0.42
USB1-203ENST00000539737 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
USB1-203ENST00000539737 BAATQ14032 418 aaPredicted RBP17.64■□□□□ 0.41
USB1-203ENST00000539737 CCDC96Q2M329 555 aa17.64■□□□□ 0.41
USB1-203ENST00000539737 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
USB1-203ENST00000539737 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
USB1-203ENST00000539737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
USB1-203ENST00000539737 PTPRSQ13332 1948 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 ASB14A6NK59 587 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 TRIM6-TRIM34B2RNG4 842 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 BMP1P13497 986 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
USB1-203ENST00000539737 FAM47CQ5HY64 1035 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 GMCL1Q96IK5 515 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 NAPBQ9H115 298 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 TNKSO95271 1327 aa17.63■□□□□ 0.41
USB1-203ENST00000539737 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
USB1-203ENST00000539737 PDE4AP27815 886 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 CHURC1Q8WUH1 139 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 GPCPD1Q9NPB8 672 aa17.62■□□□□ 0.41
USB1-203ENST00000539737 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 TSPY2A6NKD2 308 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 CALML3P27482 149 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 ALDH5A1P51649 535 aaPredicted RBP17.61■□□□□ 0.41
USB1-203ENST00000539737 PDE4BQ07343 736 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 KHSRPQ92945 711 aaKnown RBP eCLIP17.61■□□□□ 0.41
USB1-203ENST00000539737 WDR11Q9BZH6 1224 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
USB1-203ENST00000539737 EPHX3Q9H6B9 360 aa17.61■□□□□ 0.41
USB1-203ENST00000539737 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
USB1-203ENST00000539737 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
USB1-203ENST00000539737 CABYRO75952 493 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 PURAQ00577 322 aaKnown RBP17.6■□□□□ 0.41
USB1-203ENST00000539737 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 IQSEC1Q6DN90 963 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
USB1-203ENST00000539737 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
USB1-203ENST00000539737 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 ARIH2O95376 493 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
USB1-203ENST00000539737 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 VTA1Q9NP79 307 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
USB1-203ENST00000539737 HIP1O00291 1037 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 ZEB2O60315 1214 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 ICAM1P05362 532 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms