RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 PWP2Q15269 919 aaKnown RBP19.6■□□□□ 0.73
DDB1-215ENST00000539712 QRICH1Q2TAL8 776 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 USH1GQ495M9 461 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 PCSK9Q8NBP7 692 aaKnown RBP19.6■□□□□ 0.73
DDB1-215ENST00000539712 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 BADQ92934 168 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 MTMR8Q96EF0 704 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 TOX2Q96NM4 488 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 LBHD1Q9BQE6 289 aaPredicted RBP19.6■□□□□ 0.73
DDB1-215ENST00000539712 PRDM5Q9NQX1 630 aaPredicted RBP19.6■□□□□ 0.73
DDB1-215ENST00000539712 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
DDB1-215ENST00000539712 RBM47A0AV96 593 aaKnown RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
DDB1-215ENST00000539712 PQBP1O60828 265 aaKnown RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 ANTXR2P58335 489 aa19.59■□□□□ 0.73
DDB1-215ENST00000539712 COL9A3Q14050 684 aaPredicted RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 LSG1Q9H089 658 aaKnown RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 SPC25Q9HBM1 224 aa19.59■□□□□ 0.73
DDB1-215ENST00000539712 VAT1LQ9HCJ6 419 aa19.59■□□□□ 0.73
DDB1-215ENST00000539712 PRKAG2Q9UGJ0 569 aa19.59■□□□□ 0.73
DDB1-215ENST00000539712 RBM8AQ9Y5S9 174 aaKnown RBP19.59■□□□□ 0.73
DDB1-215ENST00000539712 DYNC1LI2O43237 492 aaPredicted RBP19.58■□□□□ 0.72
DDB1-215ENST00000539712 PPP1R11O60927 126 aaPredicted RBP19.58■□□□□ 0.72
DDB1-215ENST00000539712 CLTBP09497 229 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 TRDNQ13061 729 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 CHST3Q7LGC8 479 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 TLK2Q86UE8 772 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.72
DDB1-215ENST00000539712 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 GLT1D1Q96MS3 346 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 COL20A1Q9P218 1284 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 Q9Y3F1 56 aa19.58■□□□□ 0.72
DDB1-215ENST00000539712 GRIN2DO15399 1336 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 ABCB11O95342 1321 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 KLRF2D3W0D1 207 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 OPLAHO14841 1288 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 IFIT3O14879 490 aaKnown RBP19.57■□□□□ 0.72
DDB1-215ENST00000539712 TROAPQ12815 778 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 FSCN1Q16658 493 aaKnown RBP19.57■□□□□ 0.72
DDB1-215ENST00000539712 DUSP28Q4G0W2 176 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 KIAA1211Q6ZU35 1233 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
DDB1-215ENST00000539712 CENPQQ7L2Z9 268 aaPredicted RBP19.57■□□□□ 0.72
DDB1-215ENST00000539712 DNERQ8NFT8 737 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 NCOA7Q8NI08 942 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 SYTL5Q8TDW5 730 aaPredicted RBP19.57■□□□□ 0.72
DDB1-215ENST00000539712 ESYT1Q9BSJ8 1104 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 MAF1Q9H063 256 aa19.57■□□□□ 0.72
DDB1-215ENST00000539712 A0A0C4DFX4 3053 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 ARVCFO00192 962 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 EPHB4P54760 987 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 GRM4Q14833 912 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 CXCL17Q6UXB2 119 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 FBXO11Q86XK2 927 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 SLC43A3Q8NBI5 491 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 WDR11Q9BZH6 1224 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 GPHNQ9NQX3 736 aaPredicted RBP19.56■□□□□ 0.72
DDB1-215ENST00000539712 TBX21Q9UL17 535 aa19.56■□□□□ 0.72
DDB1-215ENST00000539712 SHHQ15465 462 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 BMP2KLQ5H9B9 411 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 GPR153Q6NV75 609 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 TAAR1Q96RJ0 339 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 AP5M1Q9H0R1 490 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 TMEM39AQ9NV64 488 aa19.55■□□□□ 0.72
DDB1-215ENST00000539712 A0A0U1RQG5 324 aaPredicted RBP19.54■□□□□ 0.72
DDB1-215ENST00000539712 DCDC2CA8MYV0 355 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 CYTH3O43739 400 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 GHRHRQ02643 423 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 NECTIN1Q15223 517 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 RALYLQ86SE5 291 aaKnown RBP19.54■□□□□ 0.72
DDB1-215ENST00000539712 FAM126BQ8IXS8 530 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 RIOX1Q9H6W3 641 aa19.54■□□□□ 0.72
DDB1-215ENST00000539712 BAZ2BQ9UIF8 2168 aaKnown RBP19.54■□□□□ 0.72
DDB1-215ENST00000539712 ZBTB5O15062 677 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
DDB1-215ENST00000539712 CD4P01730 458 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 PDE4DQ08499 809 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 WTAPQ15007 396 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 VTI1AQ96AJ9 217 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 AMNQ9BXJ7 453 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
DDB1-215ENST00000539712 MYH6P13533 1939 aa19.53■□□□□ 0.72
DDB1-215ENST00000539712 SLC27A2O14975 620 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 CABYRO75952 493 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 ARIH2O95376 493 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 HSD17B4P51659 736 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 CCDC62Q6P9F0 684 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 MCF2L2Q86YR7 1114 aa19.52■□□□□ 0.72
DDB1-215ENST00000539712 TIMP1P01033 207 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 RAG1P15918 1043 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 PSMC6P62333 389 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 ITGA7Q13683 1181 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 CREB3L3Q68CJ9 461 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 Q7L0L9 218 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 NSUN6Q8TEA1 469 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms