RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PLCG1P19174 1290 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 INF2Q27J81 1249 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 DNAJC21Q5F1R6 531 aaKnown RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 EMBQ6PCB8 327 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 C10orf67Q8IYJ2 551 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 RNF10Q8N5U6 811 aaKnown RBP14.76□□□□□ -0.05
UBE3B-209ENST00000539584 PPM1EQ8WY54 764 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 CALML4Q96GE6 196 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 SH2D4AQ9H788 454 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 STK17AQ9UEE5 414 aa14.76□□□□□ -0.05
UBE3B-209ENST00000539584 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 hCG_1984214I3L0E3 225 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 PJA2O43164 708 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 PHACTR2O75167 634 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 CORO7P57737 925 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 LRRC63Q05C16 580 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 PPFIA1Q13136 1202 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 NONOQ15233 471 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 ALS2CLQ60I27 953 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 ZNF713Q8N859 430 aaPredicted RBP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 GPKOWQ92917 476 aaPredicted RBP eCLIP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 TRERF1Q96PN7 1200 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 IFIH1Q9BYX4 1025 aaKnown RBP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 C6orf50Q9HD87 102 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 IL17RBQ9NRM6 502 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 HYOU1Q9Y4L1 999 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 SRGAP2O75044 1071 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 EPB41P11171 864 aaKnown RBP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 ASIC1P78348 528 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 GSTO1P78417 241 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 NNTQ13423 1086 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 MAN2A1Q16706 1144 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 VWA3BQ502W6 1294 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 EFCAB13Q8IY85 973 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 CAPZA3Q96KX2 299 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 TRIM34Q9BYJ4 488 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 NYXQ9GZU5 481 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
UBE3B-209ENST00000539584 LCMT1Q9UIC8 334 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 PCDHA13Q9Y5I0 950 aa14.75□□□□□ -0.05
UBE3B-209ENST00000539584 SSU72P8A0A1W2PR75 194 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 ESYT2A0FGR8 921 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 GGCXP38435 758 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 PAFAH1B1P43034 410 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 EPHB4P54760 987 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 RPS8P62241 208 aaKnown RBP14.74□□□□□ -0.05
UBE3B-209ENST00000539584 STK4Q13043 487 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 PSMD2Q13200 908 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 TXNRD1Q16881 649 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 ERFEQ4G0M1 354 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 TYW1BQ6NUM6 668 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 HEATR3Q7Z4Q2 680 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
UBE3B-209ENST00000539584 ZNF444Q8N0Y2 327 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-209ENST00000539584 GUF1Q8N442 669 aaKnown RBP14.74□□□□□ -0.05
UBE3B-209ENST00000539584 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 RCCD1A6NED2 376 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 ADAMTS3O15072 1205 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 BAG3O95817 575 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 TSPY3P0CV98 308 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 TSPY8P0CW00 308 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 APBA1Q02410 837 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 SV2BQ7L1I2 683 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 DZIP1Q86YF9 867 aaKnown RBP14.73□□□□□ -0.05
UBE3B-209ENST00000539584 PROM2Q8N271 834 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 STAG2Q8N3U4 1231 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 RAB34Q9BZG1 259 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 NDST4Q9H3R1 872 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 DEF6Q9H4E7 631 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 RIC8AQ9NPQ8 531 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 WNK3Q9BYP7 1800 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 AGPSO00116 658 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 PDE2AO00408 941 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-209ENST00000539584 KIF11P52732 1056 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 PPP4CP60510 307 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-209ENST00000539584 ITPK1Q13572 414 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 WDR66Q8TBY9 1149 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 RASGRP4Q8TDF6 673 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 SYN2Q92777 582 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-209ENST00000539584 CAVIN3Q969G5 261 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 SH3GL2Q99962 352 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 LRWD1Q9UFC0 647 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 RSPH14Q9UHP6 348 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 SIK3Q9Y2K2 1263 aa14.73□□□□□ -0.05
UBE3B-209ENST00000539584 TRIM66O15016 1216 aa14.72□□□□□ -0.05
UBE3B-209ENST00000539584 CYTH3O43739 400 aa14.72□□□□□ -0.05
UBE3B-209ENST00000539584 CCNT1O60563 726 aaKnown RBP14.72□□□□□ -0.05
UBE3B-209ENST00000539584 CYP2D6P10635 497 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms