RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 RHOBTB3O94955 611 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 FGRP09769 529 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 GOLGA6DP0CG33 693 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 CCT5P48643 541 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 MECOMQ03112 1051 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 KIF5AQ12840 1032 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 TTC31Q49AM3 519 aaPredicted RBP22.63■■□□□ 1.21
TMEM260-203ENST00000539559 BICDL1Q6ZP65 573 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 HEATR3Q7Z4Q2 680 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 CREG2Q8IUH2 290 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 FAM207AQ9NSI2 230 aaPredicted RBP22.63■■□□□ 1.21
TMEM260-203ENST00000539559 GOLGA6AQ9NYA3 693 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 PCDHA4Q9UN74 947 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 ZNF804BA4D1E1 1349 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 USP17L8P0C7I0 530 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 MIIPQ5JXC2 388 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 FAM84BQ96KN1 310 aaPredicted RBP22.62■■□□□ 1.21
TMEM260-203ENST00000539559 KBTBD4Q9NVX7 518 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 TFCP2L1Q9NZI6 479 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 PCDHA6Q9UN73 950 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 PCDHA8Q9Y5H6 950 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 PRDX5P30044 214 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 ASIC1P78348 528 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 ZBED6P86452 979 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 SMIM5Q71RC9 77 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 FAM76AQ8TAV0 307 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 P2RX5Q93086 422 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 DYNLL2Q96FJ2 89 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 CCDC42Q96M95 316 aa22.62■■□□□ 1.21
TMEM260-203ENST00000539559 RTCBQ9Y3I0 505 aaKnown RBP22.62■■□□□ 1.21
TMEM260-203ENST00000539559 LAMB2P55268 1798 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 ZPR1O75312 459 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 MCM3P25205 808 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 TBC1D9BQ66K14 1250 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 GOLGA8HP0CJ92 632 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 DNA2P51530 1060 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 KCNB1Q14721 858 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 TXNRD1Q16881 649 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 EHBP1Q8NDI1 1231 aa22.61■■□□□ 1.21
TMEM260-203ENST00000539559 IPO4Q8TEX9 1081 aaKnown RBP22.61■■□□□ 1.21
TMEM260-203ENST00000539559 VAV2P52735 878 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 TFAP4Q01664 338 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 NSUN4Q96CB9 384 aaKnown RBP22.6■■□□□ 1.21
TMEM260-203ENST00000539559 SLC39A2Q9NP94 309 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 IL17RBQ9NRM6 502 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 ARHGAP20Q9P2F6 1191 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 USP17L3A6NCW0 530 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 USP17L4A6NCW7 530 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 CALML3P27482 149 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 SF3B3Q15393 1217 aaKnown RBP22.6■■□□□ 1.21
TMEM260-203ENST00000539559 CAVIN4Q5BKX8 364 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 USP17L1Q7RTZ2 530 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 TSEN2Q8NCE0 465 aaKnown RBP22.6■■□□□ 1.21
TMEM260-203ENST00000539559 AENQ8WTP8 325 aaKnown RBP22.6■■□□□ 1.21
TMEM260-203ENST00000539559 SNX12Q9UMY4 172 aa22.6■■□□□ 1.21
TMEM260-203ENST00000539559 IRAK1P51617 712 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 PURBQ96QR8 312 aaKnown RBP22.59■■□□□ 1.21
TMEM260-203ENST00000539559 SETDB2Q96T68 719 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 IFIH1Q9BYX4 1025 aaKnown RBP22.59■■□□□ 1.21
TMEM260-203ENST00000539559 NYXQ9GZU5 481 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 MCM9Q9NXL9 1143 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 CYTH3O43739 400 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 CCNE1P24864 410 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 SPA17Q15506 151 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 PNMA1Q8ND90 353 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 SRP68Q9UHB9 627 aaKnown RBP22.59■■□□□ 1.21
TMEM260-203ENST00000539559 SALL4Q9UJQ4 1053 aa22.59■■□□□ 1.21
TMEM260-203ENST00000539559 ORC4O43929 436 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
TMEM260-203ENST00000539559 CABP7Q86V35 215 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 ANKRD18AQ8IVF6 992 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 RPGRIP1Q96KN7 1286 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 TRIM9Q9C026 710 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 PCDHA13Q9Y5I0 950 aa22.58■■□□□ 1.21
TMEM260-203ENST00000539559 EIF4A3P38919 411 aaKnown RBP22.58■■□□□ 1.2
TMEM260-203ENST00000539559 LETM2Q2VYF4 491 aa22.58■■□□□ 1.2
TMEM260-203ENST00000539559 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.2
TMEM260-203ENST00000539559 CCDC170Q8IYT3 715 aa22.58■■□□□ 1.2
TMEM260-203ENST00000539559 SPATA4Q8NEY3 305 aa22.58■■□□□ 1.2
TMEM260-203ENST00000539559 FAM184BQ9ULE4 1060 aa22.58■■□□□ 1.2
TMEM260-203ENST00000539559 SCN7AQ01118 1682 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 M0R2N6 131 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 KIF5BP33176 963 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 PPARDQ03181 441 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 TMC4Q7Z404 712 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 MICALL1Q8N3F8 863 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 CCDC155Q8N6L0 562 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
TMEM260-203ENST00000539559 ARL8AQ96BM9 186 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 DHTKD1Q96HY7 919 aaPredicted RBP22.57■■□□□ 1.2
TMEM260-203ENST00000539559 MS4A14Q96JA4 679 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 MMRN2Q9H8L6 949 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 EFCC1Q9HA90 598 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 SAMM50Q9Y512 469 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 FLT1P17948 1338 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 ANO9A1A5B4 782 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 TECP42680 631 aa22.57■■□□□ 1.2
TMEM260-203ENST00000539559 KCTD19Q17RG1 926 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms