RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 AK2P54819 239 aa18.25■□□□□ 0.51
RPAIN-206ENST00000539417 ANO1Q5XXA6 986 aa18.25■□□□□ 0.51
RPAIN-206ENST00000539417 MAMDC4Q6UXC1 1216 aa18.25■□□□□ 0.51
RPAIN-206ENST00000539417 RRP36Q96EU6 259 aaKnown RBP18.25■□□□□ 0.51
RPAIN-206ENST00000539417 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
RPAIN-206ENST00000539417 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 ZNF865P0CJ78 1059 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 GJA8P48165 433 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 STK3Q13188 491 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 LHX8Q68G74 356 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 SYTL5Q8TDW5 730 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 U2AF1L4Q8WU68 220 aaKnown RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 TAAR1Q96RJ0 339 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 PNMA2Q9UL42 364 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
RPAIN-206ENST00000539417 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 V9GY48 417 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-206ENST00000539417 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 LARGE1O95461 756 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 SGPL1O95470 568 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 CFBP00751 764 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 CNGA1P29973 690 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 RCAN1P53805 252 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 NTRK3Q16288 839 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 TYW1BQ6NUM6 668 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 LENG1Q96BZ8 264 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-206ENST00000539417 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-206ENST00000539417 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
RPAIN-206ENST00000539417 ADCY6O43306 1168 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
RPAIN-206ENST00000539417 PTGS1P23219 599 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-206ENST00000539417 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-206ENST00000539417 NEK4P51957 841 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 PHKBQ93100 1093 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 CRISPLD2Q9H0B8 497 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-206ENST00000539417 SYNGAP1Q96PV0 1343 aa18.22■□□□□ 0.51
RPAIN-206ENST00000539417 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.51
RPAIN-206ENST00000539417 HSD17B4P51659 736 aa18.21■□□□□ 0.51
RPAIN-206ENST00000539417 TMEM63BQ5T3F8 832 aa18.21■□□□□ 0.51
RPAIN-206ENST00000539417 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
RPAIN-206ENST00000539417 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
RPAIN-206ENST00000539417 ZNF274Q96GC6 653 aaPredicted RBP18.21■□□□□ 0.51
RPAIN-206ENST00000539417 MNX1P50219 401 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 GHRHRQ02643 423 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 PDGFCQ9NRA1 345 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 DDX20Q9UHI6 824 aaKnown RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 ZHX1Q9UKY1 873 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 TFRCP02786 760 aaKnown RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 RGS19P49795 217 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 SCRN1Q12765 414 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 ACVR2BQ13705 512 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 PKN1Q16512 942 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 HEATR3Q7Z4Q2 680 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 DIS3LQ8TF46 1054 aaKnown RBP18.2■□□□□ 0.5
RPAIN-206ENST00000539417 BACH2Q9BYV9 841 aa18.2■□□□□ 0.5
RPAIN-206ENST00000539417 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.19■□□□□ 0.5
RPAIN-206ENST00000539417 SEPT4O43236 478 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 USP17L6PQ6QN14 398 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 DNAH12Q6ZR08 3092 aa18.19■□□□□ 0.5
RPAIN-206ENST00000539417 ASB14A6NK59 587 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 STXBP3O00186 592 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 MEIS2O14770 477 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 EIF2AK2P19525 551 aaKnown RBP18.18■□□□□ 0.5
RPAIN-206ENST00000539417 EDNRBP24530 442 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 ME3Q16798 604 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 CCDC144BQ3MJ40 725 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 FCHSD1Q86WN1 690 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 IL31RAQ8NI17 732 aa18.18■□□□□ 0.5
RPAIN-206ENST00000539417 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-206ENST00000539417 ADD3Q9UEY8 706 aaKnown RBP18.18■□□□□ 0.5
RPAIN-206ENST00000539417 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-206ENST00000539417 POLR2MP0CAP2 368 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 IFNAR1P17181 557 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 UBE2SQ16763 222 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 PFKFB3Q16875 520 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-206ENST00000539417 UBE2Q1Q7Z7E8 422 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 RMDN3Q96TC7 470 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms