RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SUGT1Q9Y2Z0 365 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 X6R8D5 127 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 A0A0A0MRY4 1105 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ERC2O15083 957 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SLC16A6O15403 523 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SRGAP3O43295 1099 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 MAP4K4O95819 1239 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CELA2BP08218 269 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ADH5P11766 374 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 IFNGR1P15260 489 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CD68P34810 354 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 HERVK_113P62684 666 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ITKQ08881 620 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PABPC4Q13310 644 aaKnown RBP eCLIP1.46□□□□□ -2.188e-8■□□□□ 10.9
HIF1A-204ENST00000539097 HSF5Q4G112 596 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 KCNT2Q6UVM3 1135 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 C16orf59Q7L2K0 433 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 DDX42Q86XP3 938 aaKnown RBP eCLIP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PASD1Q8IV76 773 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ARMC10Q8N2F6 343 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SAMD3Q8N6K7 520 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CORO1BQ9BR76 489 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 AARSD1Q9BTE6 412 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 RTFDC1Q9BY42 306 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 ASPSCR1Q9BZE9 553 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 OSBPL6Q9BZF3 934 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CDIP1Q9H305 208 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 C1GALT1Q9NS00 363 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PPARGC1AQ9UBK2 798 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 LUC7L2Q9Y383 392 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 TTBK1Q5TCY1 1321 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 DLX3O60479 287 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CLASP2O75122 1294 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 VAMP4O75379 141 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 APBA3O96018 575 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 LMNB1P20700 586 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 BMP8BP34820 402 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CD96P40200 585 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 STAT3P40763 770 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 MECP2P51608 486 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SESN2P58004 480 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CHRNEQ04844 493 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 PDE3AQ14432 1141 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CYP27C1Q4G0S4 372 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 SGO2Q562F6 1265 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 BRDTQ58F21 947 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 HSP90AB2PQ58FF8 381 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 OGFOD3Q6PK18 319 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM145Q8NBT3 493 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 NETO2Q8NC67 525 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 LINC00116Q8NCU8 138 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 GATA6Q92908 595 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 HEXIM2Q96MH2 286 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 B4GALT6Q9UBX8 382 aa1.46□□□□□ -2.18
HIF1A-204ENST00000539097 MRPS23Q9Y3D9 190 aaKnown RBP1.46□□□□□ -2.18
HIF1A-204ENST00000539097 CNTNAP5Q8WYK1 1306 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 PLEKHD1A6NEE1 506 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ARVCFO00192 962 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 MEIS1O00470 390 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 KCNK3O14649 394 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SIGLEC6O43699 453 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GDF11O95390 407 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 PEX11BO96011 259 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CDK11BP21127 795 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CHRNA4P43681 627 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF445P59923 1031 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ETF1P62495 437 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GALEQ14376 348 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SLC9A5Q14940 896 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 EPHA7Q15375 998 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 PAOXQ6QHF9 649 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 UBE2R2Q712K3 238 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CBARPQ8N350 705 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 FBLIM1Q8WUP2 373 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 DLG3Q92796 817 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SDCCAG3Q96C92 435 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 MEGF10Q96KG7 1140 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 FOXP3Q9BZS1 431 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM8AQ9HCN3 771 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 AP4E1Q9UPM8 1137 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ATP8A1Q9Y2Q0 1164 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GPR55Q9Y2T6 319 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 KAT6BQ8WYB5 2073 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 H0Y8X5 98 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 PPM1BO75688 479 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 EOMESO95936 686 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 NFICP08651 508 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 MYCLP1P12525 358 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ITIH2P19823 946 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 HTR3AP46098 478 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SESN3P58005 492 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 POU4F1Q01851 419 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 TRIM28Q13263 835 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GTF2H3Q13889 308 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ODF1Q14990 250 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GNPTABQ3T906 1256 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 METTL24Q5JXM2 366 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SLC35F1Q5T1Q4 408 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CREB3L3Q68CJ9 461 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms