RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 MYH3P11055 1940 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 ANKRD31Q8N7Z5 1873 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 DDX60Q8IY21 1712 aaKnown RBP5.34□□□□□ -1.56
SNHG1-208ENST00000538266 A0A0G2JLW4 131 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 IGHA1P01876 353 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 GNAI2P04899 355 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 SLFN14P0C7P3 912 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 DRD2P14416 443 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 CHRNA5P30532 468 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 ALDH1B1P30837 517 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 DOC2BQ14184 412 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 LRRC14Q15048 493 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 MAP3K11Q16584 847 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 CRY2Q49AN0 593 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 TAF7LQ5H9L4 462 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 SLC10A5Q5PT55 438 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 C20orf194Q5TEA3 1177 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 TTBK2Q6IQ55 1244 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 STYK1Q6J9G0 422 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 FDX2Q6P4F2 183 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 PDZD3Q86UT5 571 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 SMG8Q8ND04 991 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 ZNF622Q969S3 477 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 WDR89Q96FK6 387 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 MASTLQ96GX5 879 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 MEGF10Q96KG7 1140 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 CDC5LQ99459 802 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 SYT17Q9BSW7 474 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 NOC4LQ9BVI4 516 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 PLA2G12BQ9BX93 195 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 BICC1Q9H694 974 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 CCDC86Q9H6F5 360 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 PIM2Q9P1W9 311 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 LRRFIP2Q9Y608 721 aaKnown RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 DLEC1Q9Y238 1755 aa5.33□□□□□ -1.56
SNHG1-208ENST00000538266 COL11A2P13942 1736 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-208ENST00000538266 KLRG2A4D1S0 409 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-208ENST00000538266 UNCXA6NJT0 531 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 AOC2O75106 756 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 SRGNP10124 158 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 DPEP1P16444 411 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 LMNB1P20700 586 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 CASP7P55210 303 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 IFIT5Q13325 482 aaKnown RBP5.32□□□□□ -1.56
SNHG1-208ENST00000538266 SF3B3Q15393 1217 aaKnown RBP5.32□□□□□ -1.56
SNHG1-208ENST00000538266 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 CCDC57Q2TAC2 916 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 DALRD3Q5D0E6 543 aaKnown RBP5.32□□□□□ -1.56
SNHG1-208ENST00000538266 PCNX4Q63HM2 1172 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 ANKRD34AQ69YU3 496 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 LMBR1LQ6UX01 489 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 RELL1Q8IUW5 271 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 TTLL6Q8N841 843 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 NLGN2Q8NFZ4 835 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 TTLL11Q8NHH1 800 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 TP53INP1Q96A56 240 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 SUCLG2Q96I99 432 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 CRAMP1Q96RY5 1269 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 GREM2Q9H772 168 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 SUGCTQ9HAC7 445 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 KRT82Q9NSB4 513 aa5.32□□□□□ -1.56
SNHG1-208ENST00000538266 RTL9Q8NET4 1388 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 CACNA1SQ13698 1873 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 ANKRD18BA2A2Z9 1011 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 SRGAP3O43295 1099 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 ZNF862O60290 1169 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 HMMRO75330 724 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 BBOX1O75936 387 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 HOXA10P31260 410 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 IGHMBP2P38935 993 aaKnown RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 RBM25P49756 843 aaKnown RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 FOXO4P98177 505 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 SOX4Q06945 474 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 ZNF252P-AS1Q0IIN9 211 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 GRAPQ13588 217 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 GPR162Q16538 588 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 LDLRAD1Q5T700 205 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 SOGA3Q5TF21 947 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 RASIP1Q5U651 963 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 LLGL2Q6P1M3 1020 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 Q6ZS46 218 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 DYMQ7RTS9 669 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 ANKRD18AQ8IVF6 992 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 GRAPLQ8TC17 118 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 CRBNQ96SW2 442 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 MPHOSPH8Q99549 860 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 SSBP4Q9BWG4 385 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-208ENST00000538266 TPSG1Q9NRR2 321 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
SNHG1-208ENST00000538266 BRCA1P38398 1863 aaKnown RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 SPEF2Q9C093 1822 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 MINDY4BA8MYZ0 360 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 PROCP04070 461 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 CSF1RP07333 972 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 VAMP1P23763 118 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 LIG3P49916 1009 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 USP11P51784 963 aa5.3□□□□□ -1.56
SNHG1-208ENST00000538266 RPS8P62241 208 aaKnown RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 RPS26P62854 115 aaKnown RBP5.3□□□□□ -1.56
SNHG1-208ENST00000538266 IRX6P78412 446 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms