RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 EEPD1Q7L9B9 569 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 MAF1Q9H063 256 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 PDGFCQ9NRA1 345 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 Q9Y3F1 56 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
LRRK1-211ENST00000538064 ABCB11O95342 1321 aa17.43■□□□□ 0.38
LRRK1-211ENST00000538064 EDNRBP24530 442 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 ITGB8P26012 769 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 CDK7P50613 346 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 BEX3Q00994 111 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 PTH1RQ03431 593 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 TRDNQ13061 729 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
LRRK1-211ENST00000538064 CYB5R4Q7L1T6 521 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 RGS22Q8NE09 1264 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
LRRK1-211ENST00000538064 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 TBX21Q9UL17 535 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 SCN10AQ9Y5Y9 1956 aa17.42■□□□□ 0.38
LRRK1-211ENST00000538064 ARVCFO00192 962 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 CABYRO75952 493 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 RAG1P15918 1043 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 PTGS1P23219 599 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 DUSP28Q4G0W2 176 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
LRRK1-211ENST00000538064 RBM47A0AV96 593 aaKnown RBP17.4■□□□□ 0.38
LRRK1-211ENST00000538064 ZEB2O60315 1214 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 PDE4DQ08499 809 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 SHHQ15465 462 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 QRICH1Q2TAL8 776 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 CXCL17Q6UXB2 119 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 DEFB123Q8N688 67 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 JMJD4Q9H9V9 463 aa17.4■□□□□ 0.38
LRRK1-211ENST00000538064 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
LRRK1-211ENST00000538064 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-211ENST00000538064 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
LRRK1-211ENST00000538064 FPGSQ05932 587 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
LRRK1-211ENST00000538064 SLC43A3Q8NBI5 491 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 VTI1AQ96AJ9 217 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 TAF6LQ9Y6J9 622 aa17.39■□□□□ 0.37
LRRK1-211ENST00000538064 B4DLN1 442 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 E7EWF7 191 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
LRRK1-211ENST00000538064 TIMP1P01033 207 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
LRRK1-211ENST00000538064 PPP2R5BQ15173 497 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 Q7L0L9 218 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 MCF2L2Q86YR7 1114 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
LRRK1-211ENST00000538064 MRPL11Q9Y3B7 192 aaKnown RBP17.38■□□□□ 0.37
LRRK1-211ENST00000538064 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 LAMA2P24043 3122 aaKnown RBP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 ERICH2A1L162 156 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 PALM3A6NDB9 673 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 CD4P01730 458 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 EPHB4P54760 987 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 GRM4Q14833 912 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 FAM109BQ6ICB4 259 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 SYTL5Q8TDW5 730 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 SCFD2Q8WU76 684 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
LRRK1-211ENST00000538064 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
LRRK1-211ENST00000538064 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
LRRK1-211ENST00000538064 CPT1AP50416 773 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 GHRHRQ02643 423 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 ITGA7Q13683 1181 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
LRRK1-211ENST00000538064 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 MB21D2Q8IYB1 491 aaPredicted RBP17.36■□□□□ 0.37
LRRK1-211ENST00000538064 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 VAT1LQ9HCJ6 419 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 MTMR10Q9NXD2 777 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 COL20A1Q9P218 1284 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 GRIN2DO15399 1336 aa17.36■□□□□ 0.37
LRRK1-211ENST00000538064 ZBTB5O15062 677 aa17.35■□□□□ 0.37
LRRK1-211ENST00000538064 ANTXR2P58335 489 aa17.35■□□□□ 0.37
LRRK1-211ENST00000538064 WTAPQ15007 396 aa17.35■□□□□ 0.37
LRRK1-211ENST00000538064 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
LRRK1-211ENST00000538064 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
LRRK1-211ENST00000538064 RNPC3Q96LT9 517 aaKnown RBP17.35■□□□□ 0.37
LRRK1-211ENST00000538064 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms