RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 BIN2Q9UBW5 565 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-206ENST00000537925 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
SNHG1-206ENST00000537925 LRRC37A2A6NM11 1700 aa13.28□□□□□ -0.28
SNHG1-206ENST00000537925 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 ZBTB43O43298 467 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 GNAQP50148 359 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 RCAN1P53805 252 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 MICU3Q86XE3 530 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 FANCBQ8NB91 859 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 CLEC4DQ8WXI8 215 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 BRF1Q92994 677 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 SPZ1Q9BXG8 430 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 NID2Q14112 1375 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 KIAA1217Q5T5P2 1943 aa13.27□□□□□ -0.29
SNHG1-206ENST00000537925 NFIBO00712 420 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 ZBTB5O15062 677 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 CCL5P13501 91 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 NCLP19338 710 aaKnown RBP13.26□□□□□ -0.29
SNHG1-206ENST00000537925 EVCP57679 992 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 FGD1P98174 961 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 CSPP1Q1MSJ5 1256 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 RAB11FIP4Q86YS3 637 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 CCDC144CPQ8IYA2 1237 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
SNHG1-206ENST00000537925 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 PIGSQ96S52 555 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 CYP39A1Q9NYL5 469 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 PFASO15067 1338 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 ABCB11O95342 1321 aa13.26□□□□□ -0.29
SNHG1-206ENST00000537925 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 MYCP01106 439 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 ZSCAN22P10073 491 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 CACNB2Q08289 660 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 USH1GQ495M9 461 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 MFSD14CQ5VZR4 134 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 FGD4Q96M96 766 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 MAF1Q9H063 256 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
SNHG1-206ENST00000537925 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
SNHG1-206ENST00000537925 PNMA6FA0A0J9YX94 578 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
SNHG1-206ENST00000537925 CYP2C19P33261 490 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 SOX10P56693 466 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 RTN1Q16799 776 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 MAMDC4Q6UXC1 1216 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 NSMFQ6X4W1 530 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
SNHG1-206ENST00000537925 MSL3Q8N5Y2 521 aaKnown RBP13.24□□□□□ -0.29
SNHG1-206ENST00000537925 FAM184AQ8NB25 1140 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 TINF2Q9BSI4 451 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■□□□ 14.4
SNHG1-206ENST00000537925 RNF208Q9H0X6 261 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 RBSNQ9H1K0 784 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
SNHG1-206ENST00000537925 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
SNHG1-206ENST00000537925 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 SOWAHBA6NEL2 793 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 STX6O43752 255 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 GJB1P08034 283 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 CDC27P30260 824 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 FUT2Q10981 343 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 TRAF1Q13077 416 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 ASTN1O14525 1302 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 TCHHQ07283 1943 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 OPLAHO14841 1288 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 F13A1P00488 732 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 CYBAP13498 195 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 UBE2HP62256 183 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 GHRHRQ02643 423 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms