RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 PPP4R4Q6NUP7 873 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 CASC1Q6TDU7 716 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 LILRA2Q8N149 483 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 LILRB2Q8N423 598 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 KCNN1Q92952 543 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 TSPAN18Q96SJ8 248 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 CCDC113Q9H0I3 377 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 EBF1Q9UH73 591 aa5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 NAP1L2Q9ULW6 460 aaPredicted RBP5.42□□□□□ -1.54
AC055720.2-201ENST00000537724 FITM1A5D6W6 292 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 TCAF2A6NFQ2 919 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 NPHP1O15259 732 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 SSBP05455 408 aaKnown RBP eCLIP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 POU3F3P20264 500 aaPredicted RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 GLDCP23378 1020 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 GBP1P32455 592 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 TEKQ02763 1124 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 SIM2Q14190 667 aaPredicted RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 NR0B2Q15466 257 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 C10orf62Q5T681 223 aaPredicted RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 FAM196AQ6ZSG2 479 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 ANKS3Q6ZW76 656 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 JAMLQ86YT9 394 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 SIAH1Q8IUQ4 282 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 IPO4Q8TEX9 1081 aaKnown RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 SYTL4Q96C24 671 aaPredicted RBP5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 VWCEQ96DN2 955 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 SLC26A8Q96RN1 970 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 TRIM55Q9BYV6 548 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 KBTBD4Q9NVX7 518 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 GGT7Q9UJ14 662 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 MSRB2Q9Y3D2 182 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 PPP2R3BQ9Y5P8 575 aa5.41□□□□□ -1.54
AC055720.2-201ENST00000537724 TTC36A6NLP5 189 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 CLEC16AQ2KHT3 1053 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 CCDC184Q52MB2 194 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 FBXL19Q6PCT2 694 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 KRT77Q7Z794 578 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 SYNPOQ8N3V7 929 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 MYRIPQ8NFW9 859 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 E2F7Q96AV8 911 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 SLC6A17Q9H1V8 727 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 STRIP2Q9ULQ0 834 aa5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.54
AC055720.2-201ENST00000537724 SLC22A31A6NKX4 558 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 RGS13O14921 159 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 PSPNO60542 156 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 UBOX5O94941 541 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 MYL3P08590 195 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 GALK1P51570 392 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 MCL1Q07820 350 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 DUSP4Q13115 394 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 CWF19L2Q2TBE0 894 aaKnown RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 GRAMD1BQ3KR37 738 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 ERMP1Q7Z2K6 904 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 ZNF605Q86T29 641 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 SPPL2CQ8IUH8 684 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 TTC8Q8TAM2 541 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 INTS4Q96HW7 963 aaKnown RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 TTC14Q96N46 770 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 SRRTQ9BXP5 876 aaKnown RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 MCOLN1Q9GZU1 580 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 BRMS1Q9HCU9 246 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 GPR160Q9UJ42 338 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 INTUQ9ULD6 942 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 NOL7Q9UMY1 257 aaKnown RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 YBX2Q9Y2T7 364 aaKnown RBP5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 PCDHB14Q9Y5E9 798 aa5.39□□□□□ -1.55
AC055720.2-201ENST00000537724 MYOCOSA0A1B0GUC4 107 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 TCERG1O14776 1098 aaKnown RBP5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 SCGB1D2O95969 90 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 RAG1P15918 1043 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 ATF3P18847 181 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 ETFBP38117 255 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 LINC00310P59036 64 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 CHRNEQ04844 493 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 SQSTM1Q13501 440 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 MLECQ14165 292 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 CIAPIN1Q6FI81 312 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 CREBRFQ8IUR6 639 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 USHBP1Q8N6Y0 703 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 ANKS4BQ8N8V4 417 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 CCDC89Q8N998 374 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 JMYQ8N9B5 988 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 LINC01599Q8WXQ3 324 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 G6PC3Q9BUM1 346 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 HDAC8Q9BY41 377 aa5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 ASCC2Q9H1I8 757 aaPredicted RBP5.38□□□□□ -1.55
AC055720.2-201ENST00000537724 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms