RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CLIC4Q9Y696 253 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 GCOM1H8Y6P7 765 aaPredicted RBP17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 FIBPO43427 364 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 POLR2MP0CAP2 368 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 ERVK-24P63145 666 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 NSMFQ6X4W1 530 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 NCAPG2Q86XI2 1143 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 PORCNQ9H237 461 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 CPA4Q9UI42 421 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 PCDHB6Q9Y5E3 794 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 MYH15Q9Y2K3 1946 aa17.9■□□□□ 0.46
SFSWAP-206ENST00000537582 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 PIK3CDO00329 1044 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 ERCC3P19447 782 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 TM4SF4P48230 202 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 VEGFBP49765 207 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 HSD17B4P51659 736 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 NOGQ13253 232 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 TAF1CQ15572 869 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 CLEC17AQ6ZS10 378 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 TBCKQ8TEA7 893 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 ATP6V1DQ9Y5K8 247 aa17.89■□□□□ 0.45
SFSWAP-206ENST00000537582 ECM2O94769 699 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 INHBEP58166 350 aa17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 BAATQ14032 418 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 NONOQ15233 471 aaKnown RBP eCLIP17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 ACAD9Q9H845 621 aa17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 EFCC1Q9HA90 598 aa17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 A1CFQ9NQ94 594 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 MRVI1Q9Y6F6 885 aa17.88■□□□□ 0.45
SFSWAP-206ENST00000537582 UBXN2AP68543 259 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 RNF207Q6ZRF8 634 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 GPRC5AQ8NFJ5 357 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 SYTL5Q8TDW5 730 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 GLT8D2Q9H1C3 349 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 MORF4L1Q9UBU8 362 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 PNMA2Q9UL42 364 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 RBBP6Q7Z6E9 1792 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 KRT85P78386 507 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 GHRHRQ02643 423 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 CRHR2Q13324 411 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 SF3A1Q15459 793 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 ZNF174Q15697 407 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 TKFCQ3LXA3 575 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 MCF2L2Q86YR7 1114 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 ZNF396Q96N95 335 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 CYP39A1Q9NYL5 469 aa17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-206ENST00000537582 SPDYE3A6NKU9 549 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 AP3B2Q13367 1082 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 LETM2Q2VYF4 491 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 RILPL1Q5EBL4 403 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 WDR78Q5VTH9 848 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 ANO1Q5XXA6 986 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 CHST13Q8NET6 341 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 GBP4Q96PP9 640 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 TAAR1Q96RJ0 339 aa17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-206ENST00000537582 TDP2O95551 362 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 MCM7P33993 719 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 PTPAQ15257 358 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 IL31RAQ8NI17 732 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 LEO1Q8WVC0 666 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 RTEL1Q9NZ71 1219 aa17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
SFSWAP-206ENST00000537582 TCHHQ07283 1943 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 SLC25A27O95847 323 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 BCRP11274 1271 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 MCM4P33991 863 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 CRYGNQ8WXF5 182 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 ASTN1O14525 1302 aa17.84■□□□□ 0.45
SFSWAP-206ENST00000537582 TLR2O60603 784 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 PGK2P07205 417 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 SREBF1P36956 1147 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 ARHGAP4P98171 946 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 FAM110CQ1W6H9 321 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 C17orf99Q6UX52 265 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 ANKRD35Q8N283 1001 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 LINC00301Q8NCQ3 95 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 SPATA32Q96LK8 384 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 UIMC1Q96RL1 719 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.45
SFSWAP-206ENST00000537582 LCTP09848 1927 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 SLC37A4O43826 429 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 CCNT1O60563 726 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms