RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 CDKAL1Q5VV42 579 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 LRRC31Q6UY01 552 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 GBP6Q6ZN66 633 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 NLRP10Q86W26 655 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 POTEDQ86YR6 584 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 RHOXF2Q9BQY4 288 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 RNF208Q9H0X6 261 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 HAUS4Q9H6D7 363 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 CNNM2Q9H8M5 875 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 FAM204AQ9H8W3 233 aa8.72□□□□□ -1.01
CPSF7-216ENST00000536548 SAMSN1Q9NSI8 373 aaKnown RBP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 AATFQ9NY61 560 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
CPSF7-216ENST00000536548 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ACTN4O43707 911 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 RNF40O75150 1001 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 DEXIO95424 95 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 PRR29P0C7W0 189 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 CTGFP29279 349 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 CDC27P30260 824 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 LACTBP83111 547 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 STIM1Q13586 685 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 MTF1Q14872 753 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 SART3Q15020 963 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 PPP2R5BQ15173 497 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 UBE3CQ15386 1083 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ALX1Q15699 326 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 TSR1Q2NL82 804 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 CCDC57Q2TAC2 916 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 SLC9C2Q5TAH2 1124 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 MMS22LQ6ZRQ5 1243 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ZNF662Q6ZS27 426 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 CCDC91Q7Z6B0 441 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 TADA2BQ86TJ2 420 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 DIS3L2Q8IYB7 885 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 STK11IPQ8N1F8 1099 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 TMTC2Q8N394 836 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 PLCD3Q8N3E9 789 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 FAM76AQ8TAV0 307 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 U2AF1L4Q8WU68 220 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 CNKSR2Q8WXI2 1034 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 BRI3BPQ8WY22 251 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ZNF512BQ96KM6 892 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 SLC26A6Q9BXS9 759 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 KRT23Q9C075 422 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 DEFB129Q9H1M3 183 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ZFYVE28Q9HCC9 887 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 GJB4Q9NTQ9 266 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 RMND1Q9NWS8 449 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 LIMA1Q9UHB6 759 aaKnown RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 ZMYND8Q9ULU4 1186 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-216ENST00000536548 SLC12A7Q9Y666 1083 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 IRS2Q9Y4H2 1338 aa8.71□□□□□ -1.02
CPSF7-216ENST00000536548 OTOFQ9HC10 1997 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 GOLGA8KD6RF30 607 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 FOXP2O15409 715 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 OPA1O60313 960 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 SHOX2O60902 331 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-216ENST00000536548 SYN1P17600 705 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 CASP14P31944 242 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 ADD2P35612 726 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 KRT83P78385 493 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 SETQ01105 290 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-216ENST00000536548 AMPD2Q01433 879 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 NTRK3Q16288 839 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
CPSF7-216ENST00000536548 APTXQ7Z2E3 356 aaKnown RBP8.7□□□□□ -1.02
CPSF7-216ENST00000536548 MICU3Q86XE3 530 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
CPSF7-216ENST00000536548 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 TDHQ8IZJ6 230 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 PHKBQ93100 1093 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 OPTNQ96CV9 577 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 AIFM3Q96NN9 605 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 CEP89Q96ST8 783 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 NCAPGQ9BPX3 1015 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 ELP3Q9H9T3 547 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 ABHD10Q9NUJ1 306 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 HPCAL4Q9UM19 191 aa8.7□□□□□ -1.02
CPSF7-216ENST00000536548 ANO9A1A5B4 782 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 ERICH2A1L162 156 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 TRIM75PA6NK02 468 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 EBAG9O00559 213 aa8.69□□□□□ -1.02
CPSF7-216ENST00000536548 IFIT3O14879 490 aaKnown RBP8.69□□□□□ -1.02
CPSF7-216ENST00000536548 N4BP3O15049 544 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms