RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ABCB11O95342 1321 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 OPLAHO14841 1288 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 CTAGE5O15320 804 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 SMPD1P17405 629 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 RXRAP19793 462 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 TNFAIP2Q03169 654 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 KCNA10Q16322 511 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
UBE3B-206ENST00000536398 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 SYTL5Q8TDW5 730 aaPredicted RBP16.6■□□□□ 0.25
UBE3B-206ENST00000536398 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
UBE3B-206ENST00000536398 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
UBE3B-206ENST00000536398 ATP11BQ9Y2G3 1177 aa16.6■□□□□ 0.25
UBE3B-206ENST00000536398 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
UBE3B-206ENST00000536398 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 ZBTB5O15062 677 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
UBE3B-206ENST00000536398 GJA9P57773 515 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 BEX3Q00994 111 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
UBE3B-206ENST00000536398 UPF3AQ9H1J1 476 aaKnown RBP16.59■□□□□ 0.25
UBE3B-206ENST00000536398 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
UBE3B-206ENST00000536398 DYNC1LI2O43237 492 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-206ENST00000536398 DDAH1O94760 285 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 ACLYP53396 1101 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 IQSEC1Q6DN90 963 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
UBE3B-206ENST00000536398 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 TSEN34Q9BSV6 310 aaKnown RBP16.58■□□□□ 0.24
UBE3B-206ENST00000536398 MTA3Q9BTC8 594 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
UBE3B-206ENST00000536398 BAZ2BQ9UIF8 2168 aaKnown RBP16.57■□□□□ 0.24
UBE3B-206ENST00000536398 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 CENPBP07199 599 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-206ENST00000536398 ASGR1P07306 291 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 CPA1P15085 419 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 EDNRBP24530 442 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 LIFRP42702 1097 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 MAGEA10P43363 369 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-206ENST00000536398 EXOSC10Q01780 885 aaKnown RBP16.57■□□□□ 0.24
UBE3B-206ENST00000536398 PDE4DQ08499 809 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 SNX17Q15036 470 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 GNASQ5JWF2 1037 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 TLK2Q86UE8 772 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 MCF2L2Q86YR7 1114 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 SRBD1Q8N5C6 995 aaKnown RBP16.57■□□□□ 0.24
UBE3B-206ENST00000536398 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 GDF15Q99988 308 aa16.57■□□□□ 0.24
UBE3B-206ENST00000536398 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 CFBP00751 764 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 CST5P28325 142 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-206ENST00000536398 MDM2Q00987 491 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-206ENST00000536398 TLE2Q04725 743 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 SH3RF1Q7Z6J0 888 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 TMTC2Q8N394 836 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-206ENST00000536398 KCNB2Q92953 911 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 LRRC37A2A6NM11 1700 aa16.56■□□□□ 0.24
UBE3B-206ENST00000536398 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
UBE3B-206ENST00000536398 MOXD2PA6NHM9 499 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-206ENST00000536398 HSD17B4P51659 736 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 NKX3-2P78367 333 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 ERICH6BQ5W0A0 696 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
UBE3B-206ENST00000536398 COPS5Q92905 334 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 RMDN3Q96TC7 470 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 STARD7Q9NQZ5 370 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
UBE3B-206ENST00000536398 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 ARIH2O95376 493 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 EIF2AK2P19525 551 aaKnown RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 HSPA4P34932 840 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 FSCN1Q16658 493 aaKnown RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 DUSP28Q4G0W2 176 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 PCSK9Q8NBP7 692 aaKnown RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 NSUN6Q8TEA1 469 aaKnown RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 VTI1AQ96AJ9 217 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms