RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 BTBD18B2RXH4 712 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 BACH1O14867 736 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 FANCGO15287 622 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 FOXN1O15353 648 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ZSCAN12O43309 604 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 STX10O60499 249 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ZRANB2O95218 330 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 MBD4O95243 580 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 DEXIO95424 95 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 CELA2BP08218 269 aaPredicted RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TPM1P09493 284 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 GUCY1A2P33402 732 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 GDF10P55107 478 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 EVA1CP58658 441 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 GNL2Q13823 731 aaKnown RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 NR1I3Q14994 352 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 SEC23AQ15436 765 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TERF2Q15554 542 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ERCC6LQ2NKX8 1250 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 CFAP100Q494V2 611 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ISM2Q6H9L7 571 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 MFSD6Q6ZSS7 791 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TAS1R3Q7RTX0 852 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 CYP2U1Q7Z449 544 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 DIS3L2Q8IYB7 885 aaKnown RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TRIM22Q8IYM9 498 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 LRRN4CLQ8ND94 238 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 MED15Q96RN5 788 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 MYL10Q9BUA6 226 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 RNF26Q9BY78 433 aaPredicted RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 RNF41Q9H4P4 317 aaPredicted RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 AATFQ9NY61 560 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 SERTAD1Q9UHV2 236 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
VPS33A-203ENST00000536212 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ZBTB1Q9Y2K1 713 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 PARP3Q9Y6F1 533 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
VPS33A-203ENST00000536212 SLIT2O94813 1529 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 COL22A1Q8NFW1 1626 aaPredicted RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 DOCK2Q92608 1830 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 A0A1B0GTH6 734 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 UBE2Q2LH0YL09 131 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 LILRA1O75019 489 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 LGR5O75473 907 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 BMP15O95972 392 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 FGRP09769 529 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 WEE1P30291 646 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 PBX1P40424 430 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 SERPINB4P48594 390 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 SCNN1DP51172 638 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 PLCD1P51178 756 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 GRIN1Q05586 938 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 WTAPQ15007 396 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 SART3Q15020 963 aaKnown RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 SPECC1LQ69YQ0 1117 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 Q6ZVU0 165 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 APTXQ7Z2E3 356 aaKnown RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 Q8N3U1 123 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 TC2NQ8N9U0 490 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 FANCBQ8NB91 859 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 GIPC2Q8TF65 315 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 SMARCE1Q969G3 411 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 PANX2Q96RD6 677 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 BAG1Q99933 345 aaPredicted RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 UTP14AQ9BVJ6 771 aaKnown RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 NACAP1Q9BZK3 213 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 UBXN6Q9BZV1 441 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 ARMT1Q9H993 441 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 STRN4Q9NRL3 753 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 ZHX1Q9UKY1 873 aaPredicted RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 PPP2R2CQ9Y2T4 447 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 NFE2L3Q9Y4A8 694 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 PCDHB6Q9Y5E3 794 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 FHOD1Q9Y613 1164 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 V9GYY5 206 aaPredicted RBP6.51□□□□□ -1.37
VPS33A-203ENST00000536212 BCL9LQ86UU0 1499 aa6.51□□□□□ -1.37
VPS33A-203ENST00000536212 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 ECM29Q5VYK3 1845 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 XIRP1Q702N8 1843 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 POLR2DO15514 142 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PRPF3O43395 683 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PRKAB2O43741 272 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 GNRH1P01148 92 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 INHAP05111 366 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PNMA6AP0CW24 399 aaPredicted RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PCP11498 1178 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SCNN1AP37088 669 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms