RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SEPT2Q15019 361 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 TATDN1Q6P1N9 297 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 IRF2BP1Q8IU81 584 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 CREBRFQ8IUR6 639 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 VPS16Q9H269 839 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 KANSL2Q9H9L4 492 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 MAGEF1Q9HAY2 307 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 YDJCA8MPS7 323 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 N4BP3O15049 544 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 ZSCAN20P17040 1043 aaPredicted RBP15.02□□□□□ -0.01
VPS33B-202ENST00000535906 TOGARAM2Q6ZUX3 1019 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 CUL5Q93034 780 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 NYAP2Q9P242 653 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 LRWD1Q9UFC0 647 aa15.02□□□□□ -0.01
VPS33B-202ENST00000535906 H7C1D1 291 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 SLC1A4P43007 532 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 FXR2P51116 673 aaKnown RBP eCLIP15.01□□□□□ -0.01
VPS33B-202ENST00000535906 COPB1P53618 953 aaKnown RBP15.01□□□□□ -0.01
VPS33B-202ENST00000535906 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-202ENST00000535906 GRB10Q13322 594 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 FBXO38Q6PIJ6 1188 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 PPFIBP1Q86W92 1011 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 PANX2Q96RD6 677 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 C7orf25Q9BPX7 421 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 PSTPIP2Q9H939 334 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 TAB2Q9NYJ8 693 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 MYH7BA7E2Y1 1941 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 POTEMA6NI47 508 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
VPS33B-202ENST00000535906 GDF11O95390 407 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 GYPCP04921 128 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 CASP14P31944 242 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 SPAG1Q07617 926 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 SLFN13Q68D06 897 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 CALML4Q96GE6 196 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-202ENST00000535906 TRIM34Q9BYJ4 488 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 PRDM10Q9NQV6 1147 aa15.01□□□□□ -0.01
VPS33B-202ENST00000535906 FANCGO15287 622 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 C21orf2O43822 256 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 MRPL12P52815 198 aaKnown RBP15□□□□□ -0.01
VPS33B-202ENST00000535906 SEMA3FQ13275 785 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 MTF1Q14872 753 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 QRICH1Q2TAL8 776 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 PPP4R3AQ6IN85 833 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 SRRTQ9BXP5 876 aaKnown RBP15□□□□□ -0.01
VPS33B-202ENST00000535906 BLOC1S4Q9NUP1 217 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 RGPD3A6NKT7 1758 aaPredicted RBP15□□□□□ -0.01
VPS33B-202ENST00000535906 RGPD4Q7Z3J3 1758 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 PPIP5K2O43314 1243 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
VPS33B-202ENST00000535906 ASIC1P78348 528 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 JAG1P78504 1218 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 ICA1Q05084 483 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 PDE4DQ08499 809 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 STK4Q13043 487 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 ERCC6LQ2NKX8 1250 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 DCAF4Q8WV16 495 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 GJA10Q969M2 543 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 PNMA5Q96PV4 448 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 NUDT12Q9BQG2 462 aa15□□□□□ -0.01
VPS33B-202ENST00000535906 PDGFDQ9GZP0 370 aaPredicted RBP15□□□□□ -0.01
VPS33B-202ENST00000535906 ITIH6Q6UXX5 1313 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 SOWAHDA6NJG2 315 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L15C9J2P7 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L13C9JLJ4 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L11C9JVI0 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L18D6R9N7 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L22D6RA61 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L17D6RBQ6 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L19D6RCP7 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L20D6RJB6 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 PSMA7O14818 248 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 MFAP3LO75121 409 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 FCER1AP12319 257 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L24Q0WX57 530 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 STIM1Q13586 685 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 PDIA5Q14554 519 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 TTI2Q6NXR4 508 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 USP17L6PQ6QN14 398 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 LRRN4CLQ8ND94 238 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 HAS1Q92839 578 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 DESI2Q9BSY9 194 aa14.99□□□□□ -0.01
VPS33B-202ENST00000535906 ATF5Q9Y2D1 282 aaPredicted RBP14.99□□□□□ -0.01
VPS33B-202ENST00000535906 AMPD3Q01432 767 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 ABCB5Q2M3G0 1257 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 ANKRD20A12PQ8NF67 263 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 EXOC1Q9NV70 894 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 DDX25Q9UHL0 483 aaKnown RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 F5H6K3 240 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 RNF225M0QZC1 329 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 H2AFXP16104 143 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 KLRC3Q07444 240 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 DMTNQ08495 405 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 MCM6Q14566 821 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms