RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
CCDC60-202ENST00000535685 CCPG1Q9ULG6 757 aa12.67□□□□□ -0.38
CCDC60-202ENST00000535685 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
CCDC60-202ENST00000535685 ELP1O95163 1332 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 A0A1W2PQ45 241 aaPredicted RBP12.66□□□□□ -0.38
CCDC60-202ENST00000535685 A0A1W2PQY0 241 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 KDM4AO75164 1064 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 SLC16A2P36021 539 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
CCDC60-202ENST00000535685 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 NUP133Q8WUM0 1156 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
CCDC60-202ENST00000535685 IL25Q9H293 177 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 Q9Y3F1 56 aa12.66□□□□□ -0.38
CCDC60-202ENST00000535685 ASTN1O14525 1302 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 B4E1Z4 1266 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ADCY6O43306 1168 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 CHMLP26374 656 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ACLYP53396 1101 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 SNAP25P60880 206 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 TLE2Q04725 743 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 KCNA10Q16322 511 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 TRIM60Q495X7 471 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 IQSEC1Q6DN90 963 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-202ENST00000535685 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 CLEC4DQ8WXI8 215 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 FERMT2Q96AC1 680 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ZSCAN10Q96SZ4 725 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-202ENST00000535685 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
CCDC60-202ENST00000535685 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 PDLIM7Q9NR12 457 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
CCDC60-202ENST00000535685 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 GNEQ9Y223 722 aaKnown RBP12.65□□□□□ -0.38
CCDC60-202ENST00000535685 ATP11BQ9Y2G3 1177 aa12.65□□□□□ -0.38
CCDC60-202ENST00000535685 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
CCDC60-202ENST00000535685 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
CCDC60-202ENST00000535685 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 CTAGE5O15320 804 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 SEC24BO95487 1268 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 CDK7P50613 346 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 ASPRV1Q53RT3 343 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
CCDC60-202ENST00000535685 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
CCDC60-202ENST00000535685 KIAA1217Q5T5P2 1943 aa12.64□□□□□ -0.39
CCDC60-202ENST00000535685 RBM47A0AV96 593 aaKnown RBP12.63□□□□□ -0.39
CCDC60-202ENST00000535685 NFIBO00712 420 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 SGSM2O43147 1006 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-202ENST00000535685 TNFAIP2Q03169 654 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
CCDC60-202ENST00000535685 SEC23AQ15436 765 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 TAPT1Q6NXT6 567 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 SEZ6LQ9BYH1 1024 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
CCDC60-202ENST00000535685 TNKSO95271 1327 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 TRIM43BA6NCK2 446 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 MYADML2A6NDP7 307 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 CABYRO75952 493 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 ASGR1P07306 291 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 CYP21A2P08686 494 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 CLTBP09497 229 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 C6orf222P0C671 652 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-202ENST00000535685 EDNRBP24530 442 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-202ENST00000535685 GNASQ5JWF2 1037 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-202ENST00000535685 LRCH3Q96II8 777 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 UBAC1Q9BSL1 405 aa12.62□□□□□ -0.39
CCDC60-202ENST00000535685 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 SMPD1P17405 629 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 IRX6P78412 446 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-202ENST00000535685 PTH1RQ03431 593 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
CCDC60-202ENST00000535685 TRDNQ13061 729 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms